Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2849 and Pf6N2E2_2850 are separated by 112 nucleotides Pf6N2E2_2850 and Pf6N2E2_2851 are separated by 175 nucleotides
Pf6N2E2_2849 - Chromosome initiation inhibitor, at 3,339,869 to 3,340,768
_2849
Pf6N2E2_2850 - Transporter, LysE family, at 3,340,881 to 3,341,468
_2850
Pf6N2E2_2851 - Superoxide dismutase [Fe] (EC 1.15.1.1), at 3,341,644 to 3,342,240
_2851
Position (kb)
3340
3341
3342 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3339.969 kb on + strand, within Pf6N2E2_2849 at 3339.969 kb on + strand, within Pf6N2E2_2849 at 3339.970 kb on - strand, within Pf6N2E2_2849 at 3340.155 kb on + strand, within Pf6N2E2_2849 at 3340.202 kb on - strand, within Pf6N2E2_2849 at 3340.620 kb on - strand, within Pf6N2E2_2849 at 3340.865 kb on + strand at 3340.865 kb on + strand at 3340.865 kb on + strand at 3340.865 kb on + strand at 3340.865 kb on + strand at 3340.866 kb on - strand at 3340.866 kb on - strand at 3340.866 kb on - strand at 3340.866 kb on - strand at 3340.878 kb on + strand at 3340.878 kb on + strand at 3340.878 kb on + strand at 3340.878 kb on + strand at 3340.879 kb on - strand at 3340.880 kb on + strand at 3340.880 kb on + strand at 3340.880 kb on + strand at 3340.880 kb on + strand at 3340.880 kb on + strand at 3340.880 kb on + strand at 3340.880 kb on + strand at 3340.880 kb on + strand at 3340.880 kb on + strand at 3340.880 kb on + strand at 3340.881 kb on - strand at 3340.881 kb on - strand at 3340.881 kb on - strand at 3340.881 kb on - strand at 3340.881 kb on - strand at 3341.113 kb on - strand, within Pf6N2E2_2850 at 3341.180 kb on - strand, within Pf6N2E2_2850 at 3341.180 kb on - strand, within Pf6N2E2_2850 at 3341.301 kb on + strand, within Pf6N2E2_2850 at 3341.301 kb on + strand, within Pf6N2E2_2850 at 3341.302 kb on - strand, within Pf6N2E2_2850 at 3341.302 kb on - strand, within Pf6N2E2_2850 at 3341.302 kb on - strand, within Pf6N2E2_2850 at 3341.436 kb on - strand at 3341.470 kb on + strand at 3341.494 kb on + strand at 3341.494 kb on + strand at 3341.518 kb on + strand at 3341.537 kb on + strand at 3341.538 kb on - strand at 3341.631 kb on + strand at 3342.315 kb on + strand at 3342.316 kb on - strand at 3342.316 kb on - strand at 3342.417 kb on + strand at 3342.418 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 3,339,969 + Pf6N2E2_2849 0.11 +0.1 3,339,969 + Pf6N2E2_2849 0.11 -0.1 3,339,970 - Pf6N2E2_2849 0.11 +0.6 3,340,155 + Pf6N2E2_2849 0.32 -0.0 3,340,202 - Pf6N2E2_2849 0.37 -0.1 3,340,620 - Pf6N2E2_2849 0.83 -0.2 3,340,865 + +1.2 3,340,865 + +1.5 3,340,865 + +1.5 3,340,865 + +0.1 3,340,865 + +1.7 3,340,866 - -0.2 3,340,866 - -0.1 3,340,866 - -2.0 3,340,866 - +0.6 3,340,878 + +0.4 3,340,878 + +1.4 3,340,878 + -1.0 3,340,878 + +0.9 3,340,879 - +2.7 3,340,880 + +0.9 3,340,880 + +1.6 3,340,880 + -0.7 3,340,880 + -1.3 3,340,880 + -1.8 3,340,880 + -1.9 3,340,880 + -0.1 3,340,880 + -0.1 3,340,880 + -0.4 3,340,880 + +1.2 3,340,881 - -3.0 3,340,881 - +0.8 3,340,881 - -0.3 3,340,881 - +0.4 3,340,881 - -1.6 3,341,113 - Pf6N2E2_2850 0.39 +0.5 3,341,180 - Pf6N2E2_2850 0.51 -3.0 3,341,180 - Pf6N2E2_2850 0.51 +1.7 3,341,301 + Pf6N2E2_2850 0.71 +1.6 3,341,301 + Pf6N2E2_2850 0.71 +0.7 3,341,302 - Pf6N2E2_2850 0.72 +1.0 3,341,302 - Pf6N2E2_2850 0.72 +0.9 3,341,302 - Pf6N2E2_2850 0.72 -0.7 3,341,436 - +1.9 3,341,470 + +0.4 3,341,494 + +0.2 3,341,494 + +1.7 3,341,518 + +1.0 3,341,537 + +0.7 3,341,538 - -0.6 3,341,631 + +0.3 3,342,315 + -0.3 3,342,316 - +0.0 3,342,316 - -0.1 3,342,417 + +2.3 3,342,418 - -0.7
Or see this region's nucleotide sequence