Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2662 and Pf6N2E2_2663 are separated by 389 nucleotides Pf6N2E2_2663 and Pf6N2E2_2664 are separated by 348 nucleotides Pf6N2E2_2664 and Pf6N2E2_2665 are separated by 189 nucleotides
Pf6N2E2_2662 - Cytosine/purine/uracil/thiamine/allantoin permease family protein, at 3,135,030 to 3,136,484
_2662
Pf6N2E2_2663 - FIG00953341: hypothetical protein, at 3,136,874 to 3,137,710
_2663
Pf6N2E2_2664 - FIG00953551: hypothetical protein, at 3,138,059 to 3,138,238
_2664
Pf6N2E2_2665 - FIG00959721: hypothetical protein, at 3,138,428 to 3,139,144
_2665
Position (kb)
3136
3137
3138 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3136.030 kb on + strand, within Pf6N2E2_2662 at 3136.060 kb on + strand, within Pf6N2E2_2662 at 3136.061 kb on - strand, within Pf6N2E2_2662 at 3136.121 kb on - strand, within Pf6N2E2_2662 at 3136.175 kb on + strand, within Pf6N2E2_2662 at 3136.176 kb on - strand, within Pf6N2E2_2662 at 3136.176 kb on - strand, within Pf6N2E2_2662 at 3136.355 kb on - strand at 3136.355 kb on - strand at 3136.402 kb on + strand at 3136.402 kb on + strand at 3136.402 kb on + strand at 3136.402 kb on + strand at 3136.402 kb on + strand at 3136.403 kb on - strand at 3136.403 kb on - strand at 3136.403 kb on - strand at 3136.403 kb on - strand at 3136.445 kb on - strand at 3136.459 kb on + strand at 3136.460 kb on - strand at 3136.657 kb on + strand at 3136.657 kb on + strand at 3136.657 kb on + strand at 3136.657 kb on + strand at 3136.657 kb on + strand at 3136.658 kb on - strand at 3136.658 kb on - strand at 3136.658 kb on - strand at 3136.658 kb on - strand at 3136.658 kb on - strand at 3136.658 kb on - strand at 3136.779 kb on - strand at 3136.779 kb on - strand at 3136.791 kb on + strand at 3136.792 kb on - strand at 3136.876 kb on - strand at 3136.876 kb on - strand at 3136.923 kb on + strand at 3137.206 kb on + strand, within Pf6N2E2_2663 at 3137.275 kb on + strand, within Pf6N2E2_2663 at 3137.276 kb on - strand, within Pf6N2E2_2663 at 3137.276 kb on - strand, within Pf6N2E2_2663 at 3137.276 kb on - strand, within Pf6N2E2_2663 at 3137.276 kb on - strand, within Pf6N2E2_2663 at 3137.276 kb on - strand, within Pf6N2E2_2663 at 3137.276 kb on - strand, within Pf6N2E2_2663 at 3137.277 kb on + strand, within Pf6N2E2_2663 at 3137.277 kb on + strand, within Pf6N2E2_2663 at 3137.277 kb on + strand, within Pf6N2E2_2663 at 3137.277 kb on + strand, within Pf6N2E2_2663 at 3137.277 kb on + strand, within Pf6N2E2_2663 at 3137.277 kb on + strand, within Pf6N2E2_2663 at 3137.278 kb on - strand, within Pf6N2E2_2663 at 3137.278 kb on - strand, within Pf6N2E2_2663 at 3137.278 kb on - strand, within Pf6N2E2_2663 at 3137.278 kb on - strand, within Pf6N2E2_2663 at 3137.278 kb on - strand, within Pf6N2E2_2663 at 3137.278 kb on - strand, within Pf6N2E2_2663 at 3137.278 kb on - strand, within Pf6N2E2_2663 at 3137.278 kb on - strand, within Pf6N2E2_2663 at 3137.278 kb on - strand, within Pf6N2E2_2663 at 3137.370 kb on + strand, within Pf6N2E2_2663 at 3137.603 kb on - strand, within Pf6N2E2_2663 at 3137.603 kb on - strand, within Pf6N2E2_2663 at 3137.605 kb on - strand, within Pf6N2E2_2663 at 3137.650 kb on - strand at 3137.651 kb on + strand at 3137.652 kb on - strand at 3137.662 kb on + strand at 3137.691 kb on + strand at 3137.718 kb on - strand at 3137.909 kb on - strand at 3137.921 kb on + strand at 3137.984 kb on + strand at 3138.006 kb on + strand at 3138.015 kb on + strand at 3138.033 kb on + strand at 3138.037 kb on + strand at 3138.066 kb on + strand at 3138.237 kb on - strand at 3138.237 kb on - strand at 3138.393 kb on + strand at 3138.394 kb on - strand at 3138.394 kb on - strand at 3138.394 kb on - strand at 3138.394 kb on - strand at 3138.394 kb on - strand at 3138.434 kb on - strand at 3138.439 kb on + strand at 3138.440 kb on - strand at 3138.629 kb on + strand, within Pf6N2E2_2665 at 3138.629 kb on + strand, within Pf6N2E2_2665 at 3138.630 kb on - strand, within Pf6N2E2_2665 at 3138.692 kb on + strand, within Pf6N2E2_2665 at 3138.692 kb on + strand, within Pf6N2E2_2665 at 3138.692 kb on + strand, within Pf6N2E2_2665 at 3138.692 kb on + strand, within Pf6N2E2_2665 at 3138.693 kb on - strand, within Pf6N2E2_2665 at 3138.693 kb on - strand, within Pf6N2E2_2665 at 3138.693 kb on - strand, within Pf6N2E2_2665 at 3138.693 kb on - strand, within Pf6N2E2_2665 at 3138.703 kb on + strand, within Pf6N2E2_2665 at 3138.704 kb on - strand, within Pf6N2E2_2665
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 3,136,030 + Pf6N2E2_2662 0.69 +0.1 3,136,060 + Pf6N2E2_2662 0.71 +0.5 3,136,061 - Pf6N2E2_2662 0.71 +0.6 3,136,121 - Pf6N2E2_2662 0.75 +0.7 3,136,175 + Pf6N2E2_2662 0.79 +1.2 3,136,176 - Pf6N2E2_2662 0.79 +0.0 3,136,176 - Pf6N2E2_2662 0.79 +0.9 3,136,355 - +0.4 3,136,355 - -1.6 3,136,402 + +2.0 3,136,402 + +2.4 3,136,402 + +2.0 3,136,402 + +0.4 3,136,402 + -0.0 3,136,403 - -1.3 3,136,403 - -0.4 3,136,403 - -0.6 3,136,403 - +0.7 3,136,445 - +0.6 3,136,459 + +1.2 3,136,460 - +1.2 3,136,657 + +0.7 3,136,657 + -1.3 3,136,657 + -0.5 3,136,657 + +1.5 3,136,657 + -0.7 3,136,658 - -1.7 3,136,658 - -2.8 3,136,658 - +1.2 3,136,658 - +1.6 3,136,658 - +1.4 3,136,658 - -0.3 3,136,779 - -0.9 3,136,779 - -2.9 3,136,791 + +1.1 3,136,792 - +0.1 3,136,876 - +0.2 3,136,876 - +0.8 3,136,923 + +0.1 3,137,206 + Pf6N2E2_2663 0.40 +0.5 3,137,275 + Pf6N2E2_2663 0.48 -1.7 3,137,276 - Pf6N2E2_2663 0.48 -0.1 3,137,276 - Pf6N2E2_2663 0.48 +0.4 3,137,276 - Pf6N2E2_2663 0.48 -0.7 3,137,276 - Pf6N2E2_2663 0.48 -2.3 3,137,276 - Pf6N2E2_2663 0.48 -0.8 3,137,276 - Pf6N2E2_2663 0.48 +0.4 3,137,277 + Pf6N2E2_2663 0.48 -1.6 3,137,277 + Pf6N2E2_2663 0.48 -0.3 3,137,277 + Pf6N2E2_2663 0.48 -1.7 3,137,277 + Pf6N2E2_2663 0.48 -0.5 3,137,277 + Pf6N2E2_2663 0.48 -2.0 3,137,277 + Pf6N2E2_2663 0.48 -0.4 3,137,278 - Pf6N2E2_2663 0.48 -0.9 3,137,278 - Pf6N2E2_2663 0.48 -1.4 3,137,278 - Pf6N2E2_2663 0.48 -1.1 3,137,278 - Pf6N2E2_2663 0.48 -1.5 3,137,278 - Pf6N2E2_2663 0.48 +0.1 3,137,278 - Pf6N2E2_2663 0.48 -0.0 3,137,278 - Pf6N2E2_2663 0.48 -0.2 3,137,278 - Pf6N2E2_2663 0.48 -2.4 3,137,278 - Pf6N2E2_2663 0.48 +1.7 3,137,370 + Pf6N2E2_2663 0.59 -1.3 3,137,603 - Pf6N2E2_2663 0.87 +0.1 3,137,603 - Pf6N2E2_2663 0.87 -0.3 3,137,605 - Pf6N2E2_2663 0.87 +0.1 3,137,650 - +1.7 3,137,651 + -0.7 3,137,652 - -2.5 3,137,662 + +0.7 3,137,691 + -0.1 3,137,718 - +0.1 3,137,909 - +1.7 3,137,921 + +1.0 3,137,984 + -1.4 3,138,006 + +0.3 3,138,015 + +0.7 3,138,033 + +0.8 3,138,037 + -0.0 3,138,066 + +0.1 3,138,237 - +1.2 3,138,237 - -2.2 3,138,393 + +1.5 3,138,394 - -0.3 3,138,394 - -1.2 3,138,394 - +0.2 3,138,394 - -0.6 3,138,394 - -0.4 3,138,434 - -1.8 3,138,439 + +1.9 3,138,440 - +0.9 3,138,629 + Pf6N2E2_2665 0.28 -0.1 3,138,629 + Pf6N2E2_2665 0.28 -0.4 3,138,630 - Pf6N2E2_2665 0.28 -0.1 3,138,692 + Pf6N2E2_2665 0.37 +1.0 3,138,692 + Pf6N2E2_2665 0.37 -1.2 3,138,692 + Pf6N2E2_2665 0.37 -1.1 3,138,692 + Pf6N2E2_2665 0.37 +0.6 3,138,693 - Pf6N2E2_2665 0.37 +0.1 3,138,693 - Pf6N2E2_2665 0.37 +0.2 3,138,693 - Pf6N2E2_2665 0.37 -0.3 3,138,693 - Pf6N2E2_2665 0.37 +0.3 3,138,703 + Pf6N2E2_2665 0.38 -0.3 3,138,704 - Pf6N2E2_2665 0.38 +1.1
Or see this region's nucleotide sequence