Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2332 and Pf6N2E2_2333 are separated by 135 nucleotides Pf6N2E2_2333 and Pf6N2E2_2334 are separated by 258 nucleotides
Pf6N2E2_2332 - DNA ligase (EC 6.5.1.2), at 2,758,304 to 2,760,661
_2332
Pf6N2E2_2333 - Cell division protein ZipA, at 2,760,797 to 2,761,642
_2333
Pf6N2E2_2334 - Chromosome partition protein smc, at 2,761,901 to 2,765,389
_2334
Position (kb)
2760
2761
2762 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2760.694 kb on - strand at 2760.715 kb on - strand at 2760.715 kb on - strand at 2760.715 kb on - strand at 2760.715 kb on - strand at 2760.715 kb on - strand at 2760.715 kb on - strand at 2760.715 kb on - strand at 2760.715 kb on - strand at 2760.715 kb on - strand at 2760.719 kb on - strand at 2760.719 kb on - strand at 2760.719 kb on - strand at 2760.719 kb on - strand at 2760.765 kb on - strand at 2760.765 kb on - strand at 2760.765 kb on - strand at 2761.686 kb on - strand at 2761.686 kb on - strand at 2761.686 kb on - strand at 2761.686 kb on - strand at 2761.754 kb on - strand at 2761.770 kb on - strand at 2761.775 kb on - strand at 2761.790 kb on - strand at 2761.796 kb on - strand at 2761.796 kb on - strand at 2761.866 kb on - strand at 2761.866 kb on - strand at 2761.866 kb on - strand at 2761.866 kb on - strand at 2761.866 kb on - strand at 2761.880 kb on - strand at 2761.880 kb on - strand at 2761.880 kb on - strand at 2761.880 kb on - strand at 2761.889 kb on - strand at 2761.977 kb on - strand at 2762.029 kb on - strand at 2762.082 kb on - strand at 2762.082 kb on - strand at 2762.265 kb on - strand, within Pf6N2E2_2334 at 2762.356 kb on + strand, within Pf6N2E2_2334 at 2762.481 kb on + strand, within Pf6N2E2_2334 at 2762.611 kb on - strand, within Pf6N2E2_2334 at 2762.611 kb on - strand, within Pf6N2E2_2334 at 2762.624 kb on + strand, within Pf6N2E2_2334 at 2762.625 kb on - strand, within Pf6N2E2_2334
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 2,760,694 - -0.5 2,760,715 - -1.5 2,760,715 - +1.4 2,760,715 - -1.2 2,760,715 - +0.3 2,760,715 - +0.0 2,760,715 - +0.8 2,760,715 - +0.9 2,760,715 - +0.3 2,760,715 - +1.6 2,760,719 - +0.7 2,760,719 - -1.6 2,760,719 - +0.7 2,760,719 - -1.0 2,760,765 - -0.8 2,760,765 - -0.7 2,760,765 - +1.2 2,761,686 - -0.9 2,761,686 - -2.1 2,761,686 - -0.6 2,761,686 - +1.8 2,761,754 - +0.4 2,761,770 - -2.1 2,761,775 - -0.6 2,761,790 - +0.6 2,761,796 - +0.2 2,761,796 - -0.9 2,761,866 - +1.6 2,761,866 - +0.3 2,761,866 - +0.3 2,761,866 - -2.4 2,761,866 - +1.2 2,761,880 - -1.7 2,761,880 - -0.1 2,761,880 - -0.3 2,761,880 - -0.2 2,761,889 - +0.8 2,761,977 - -1.0 2,762,029 - -3.0 2,762,082 - +1.0 2,762,082 - +0.5 2,762,265 - Pf6N2E2_2334 0.10 -2.1 2,762,356 + Pf6N2E2_2334 0.13 +1.0 2,762,481 + Pf6N2E2_2334 0.17 +1.2 2,762,611 - Pf6N2E2_2334 0.20 +0.3 2,762,611 - Pf6N2E2_2334 0.20 -0.7 2,762,624 + Pf6N2E2_2334 0.21 -2.2 2,762,625 - Pf6N2E2_2334 0.21 -0.1
Or see this region's nucleotide sequence