Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2141 and Pf6N2E2_2142 are separated by 17 nucleotides Pf6N2E2_2142 and Pf6N2E2_2143 are separated by 1 nucleotides Pf6N2E2_2143 and Pf6N2E2_2144 are separated by 134 nucleotides Pf6N2E2_2144 and Pf6N2E2_2145 are separated by 215 nucleotides
Pf6N2E2_2141 - Paraquat-inducible protein B, at 2,547,005 to 2,548,663
_2141
Pf6N2E2_2142 - ortholog of Bordetella pertussis (BX470248) BP2750, at 2,548,681 to 2,549,217
_2142
Pf6N2E2_2143 - Uncharacterized GST-like protein yncG, at 2,549,219 to 2,549,848
_2143
Pf6N2E2_2144 - Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1), at 2,549,983 to 2,550,555
_2144
Pf6N2E2_2145 - Putative outer membrane lipoprotein, at 2,550,771 to 2,551,865
_2145
Position (kb)
2549
2550 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2548.577 kb on + strand at 2548.577 kb on + strand at 2549.326 kb on + strand, within Pf6N2E2_2143 at 2549.326 kb on + strand, within Pf6N2E2_2143 at 2549.327 kb on - strand, within Pf6N2E2_2143 at 2549.535 kb on + strand, within Pf6N2E2_2143 at 2549.535 kb on + strand, within Pf6N2E2_2143 at 2549.553 kb on + strand, within Pf6N2E2_2143 at 2549.553 kb on + strand, within Pf6N2E2_2143 at 2549.844 kb on + strand at 2549.845 kb on - strand at 2549.854 kb on + strand at 2549.854 kb on + strand at 2549.855 kb on - strand at 2549.855 kb on - strand at 2549.855 kb on - strand at 2549.855 kb on - strand at 2549.855 kb on - strand at 2549.855 kb on - strand at 2549.855 kb on - strand at 2549.872 kb on + strand at 2549.873 kb on - strand at 2549.873 kb on - strand at 2549.938 kb on - strand at 2549.938 kb on - strand at 2549.938 kb on - strand at 2550.080 kb on + strand, within Pf6N2E2_2144 at 2550.095 kb on + strand, within Pf6N2E2_2144 at 2550.095 kb on + strand, within Pf6N2E2_2144 at 2550.095 kb on + strand, within Pf6N2E2_2144 at 2550.095 kb on + strand, within Pf6N2E2_2144 at 2550.095 kb on + strand, within Pf6N2E2_2144 at 2550.096 kb on - strand, within Pf6N2E2_2144 at 2550.552 kb on - strand at 2550.723 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 2,548,577 + -1.5 2,548,577 + -0.7 2,549,326 + Pf6N2E2_2143 0.17 -3.3 2,549,326 + Pf6N2E2_2143 0.17 -1.5 2,549,327 - Pf6N2E2_2143 0.17 -0.7 2,549,535 + Pf6N2E2_2143 0.50 -3.6 2,549,535 + Pf6N2E2_2143 0.50 -0.8 2,549,553 + Pf6N2E2_2143 0.53 -1.1 2,549,553 + Pf6N2E2_2143 0.53 +0.8 2,549,844 + +1.4 2,549,845 - -1.2 2,549,854 + +0.9 2,549,854 + +2.7 2,549,855 - -0.1 2,549,855 - -2.3 2,549,855 - -0.7 2,549,855 - +0.5 2,549,855 - -0.0 2,549,855 - -0.1 2,549,855 - -0.4 2,549,872 + +1.1 2,549,873 - -1.3 2,549,873 - +0.5 2,549,938 - +0.7 2,549,938 - -0.1 2,549,938 - +0.6 2,550,080 + Pf6N2E2_2144 0.17 -0.5 2,550,095 + Pf6N2E2_2144 0.20 -0.1 2,550,095 + Pf6N2E2_2144 0.20 -0.4 2,550,095 + Pf6N2E2_2144 0.20 +1.7 2,550,095 + Pf6N2E2_2144 0.20 +0.6 2,550,095 + Pf6N2E2_2144 0.20 +1.3 2,550,096 - Pf6N2E2_2144 0.20 -1.9 2,550,552 - +1.5 2,550,723 + -1.6
Or see this region's nucleotide sequence