Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1955 and Pf6N2E2_1956 are separated by 49 nucleotides Pf6N2E2_1956 and Pf6N2E2_1957 are separated by 3 nucleotides
Pf6N2E2_1955 - daunorubicin C-13 ketoreductase XF1741, at 2,319,960 to 2,320,559
_1955
Pf6N2E2_1956 - Outer membrane protein romA, at 2,320,609 to 2,321,745
_1956
Pf6N2E2_1957 - putative inner membrane protein, at 2,321,749 to 2,323,065
_1957
Position (kb)
2320
2321
2322 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2319.678 kb on - strand at 2319.678 kb on - strand at 2319.818 kb on + strand at 2319.818 kb on + strand at 2319.818 kb on + strand at 2319.819 kb on - strand at 2320.099 kb on + strand, within Pf6N2E2_1955 at 2320.099 kb on + strand, within Pf6N2E2_1955 at 2320.100 kb on - strand, within Pf6N2E2_1955 at 2320.122 kb on + strand, within Pf6N2E2_1955 at 2320.122 kb on + strand, within Pf6N2E2_1955 at 2320.123 kb on - strand, within Pf6N2E2_1955 at 2320.123 kb on - strand, within Pf6N2E2_1955 at 2320.124 kb on + strand, within Pf6N2E2_1955 at 2320.124 kb on + strand, within Pf6N2E2_1955 at 2320.124 kb on + strand, within Pf6N2E2_1955 at 2320.124 kb on + strand, within Pf6N2E2_1955 at 2320.124 kb on + strand, within Pf6N2E2_1955 at 2320.124 kb on + strand, within Pf6N2E2_1955 at 2320.124 kb on + strand, within Pf6N2E2_1955 at 2320.125 kb on - strand, within Pf6N2E2_1955 at 2320.125 kb on - strand, within Pf6N2E2_1955 at 2320.125 kb on - strand, within Pf6N2E2_1955 at 2320.125 kb on - strand, within Pf6N2E2_1955 at 2320.125 kb on - strand, within Pf6N2E2_1955 at 2320.164 kb on + strand, within Pf6N2E2_1955 at 2320.164 kb on + strand, within Pf6N2E2_1955 at 2320.165 kb on - strand, within Pf6N2E2_1955 at 2320.165 kb on - strand, within Pf6N2E2_1955 at 2320.165 kb on - strand, within Pf6N2E2_1955 at 2320.185 kb on - strand, within Pf6N2E2_1955 at 2320.246 kb on - strand, within Pf6N2E2_1955 at 2320.316 kb on + strand, within Pf6N2E2_1955 at 2320.317 kb on - strand, within Pf6N2E2_1955 at 2320.573 kb on - strand at 2320.576 kb on + strand at 2320.577 kb on - strand at 2320.577 kb on - strand at 2320.577 kb on - strand at 2320.577 kb on - strand at 2320.577 kb on - strand at 2320.590 kb on - strand at 2320.635 kb on - strand at 2320.657 kb on + strand at 2320.658 kb on - strand at 2320.661 kb on + strand at 2320.661 kb on + strand at 2320.662 kb on - strand at 2320.662 kb on - strand at 2320.662 kb on - strand at 2320.662 kb on - strand at 2320.662 kb on - strand at 2320.891 kb on - strand, within Pf6N2E2_1956 at 2320.899 kb on + strand, within Pf6N2E2_1956 at 2320.899 kb on + strand, within Pf6N2E2_1956 at 2320.900 kb on - strand, within Pf6N2E2_1956 at 2320.900 kb on - strand, within Pf6N2E2_1956 at 2320.901 kb on + strand, within Pf6N2E2_1956 at 2320.902 kb on - strand, within Pf6N2E2_1956 at 2320.928 kb on - strand, within Pf6N2E2_1956 at 2320.981 kb on + strand, within Pf6N2E2_1956 at 2320.981 kb on + strand, within Pf6N2E2_1956 at 2320.982 kb on - strand, within Pf6N2E2_1956 at 2321.049 kb on - strand, within Pf6N2E2_1956 at 2321.087 kb on - strand, within Pf6N2E2_1956 at 2321.102 kb on - strand, within Pf6N2E2_1956 at 2321.159 kb on + strand, within Pf6N2E2_1956 at 2321.160 kb on - strand, within Pf6N2E2_1956 at 2321.160 kb on - strand, within Pf6N2E2_1956 at 2321.276 kb on - strand, within Pf6N2E2_1956 at 2321.276 kb on - strand, within Pf6N2E2_1956 at 2321.419 kb on + strand, within Pf6N2E2_1956 at 2321.443 kb on + strand, within Pf6N2E2_1956 at 2321.443 kb on + strand, within Pf6N2E2_1956 at 2321.443 kb on + strand, within Pf6N2E2_1956 at 2321.651 kb on - strand at 2321.743 kb on + strand at 2321.743 kb on + strand at 2321.744 kb on - strand at 2321.830 kb on + strand at 2321.830 kb on + strand at 2321.831 kb on - strand at 2321.858 kb on - strand at 2321.858 kb on - strand at 2321.932 kb on - strand, within Pf6N2E2_1957 at 2322.169 kb on - strand, within Pf6N2E2_1957 at 2322.206 kb on + strand, within Pf6N2E2_1957 at 2322.344 kb on + strand, within Pf6N2E2_1957 at 2322.451 kb on + strand, within Pf6N2E2_1957 at 2322.484 kb on + strand, within Pf6N2E2_1957 at 2322.508 kb on + strand, within Pf6N2E2_1957 at 2322.508 kb on + strand, within Pf6N2E2_1957 at 2322.611 kb on + strand, within Pf6N2E2_1957
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 2,319,678 - +0.7 2,319,678 - +0.6 2,319,818 + +0.2 2,319,818 + +0.3 2,319,818 + +0.7 2,319,819 - -0.5 2,320,099 + Pf6N2E2_1955 0.23 -0.1 2,320,099 + Pf6N2E2_1955 0.23 +0.2 2,320,100 - Pf6N2E2_1955 0.23 -0.7 2,320,122 + Pf6N2E2_1955 0.27 -2.1 2,320,122 + Pf6N2E2_1955 0.27 +1.0 2,320,123 - Pf6N2E2_1955 0.27 -2.6 2,320,123 - Pf6N2E2_1955 0.27 -0.9 2,320,124 + Pf6N2E2_1955 0.27 -1.6 2,320,124 + Pf6N2E2_1955 0.27 -0.8 2,320,124 + Pf6N2E2_1955 0.27 +0.6 2,320,124 + Pf6N2E2_1955 0.27 -2.7 2,320,124 + Pf6N2E2_1955 0.27 +0.4 2,320,124 + Pf6N2E2_1955 0.27 +0.7 2,320,124 + Pf6N2E2_1955 0.27 +1.1 2,320,125 - Pf6N2E2_1955 0.28 +0.4 2,320,125 - Pf6N2E2_1955 0.28 -0.1 2,320,125 - Pf6N2E2_1955 0.28 +1.0 2,320,125 - Pf6N2E2_1955 0.28 -0.1 2,320,125 - Pf6N2E2_1955 0.28 +0.8 2,320,164 + Pf6N2E2_1955 0.34 +0.8 2,320,164 + Pf6N2E2_1955 0.34 -0.4 2,320,165 - Pf6N2E2_1955 0.34 -1.9 2,320,165 - Pf6N2E2_1955 0.34 +1.2 2,320,165 - Pf6N2E2_1955 0.34 -0.1 2,320,185 - Pf6N2E2_1955 0.38 +1.3 2,320,246 - Pf6N2E2_1955 0.48 +0.1 2,320,316 + Pf6N2E2_1955 0.59 +0.4 2,320,317 - Pf6N2E2_1955 0.59 +1.2 2,320,573 - -0.3 2,320,576 + +0.2 2,320,577 - -1.2 2,320,577 - -1.6 2,320,577 - +0.9 2,320,577 - -3.6 2,320,577 - -0.6 2,320,590 - +0.2 2,320,635 - +0.0 2,320,657 + +0.3 2,320,658 - -0.1 2,320,661 + +1.1 2,320,661 + -1.3 2,320,662 - -0.6 2,320,662 - +1.6 2,320,662 - -0.0 2,320,662 - -0.5 2,320,662 - +0.7 2,320,891 - Pf6N2E2_1956 0.25 +1.0 2,320,899 + Pf6N2E2_1956 0.26 +0.7 2,320,899 + Pf6N2E2_1956 0.26 +0.8 2,320,900 - Pf6N2E2_1956 0.26 -2.6 2,320,900 - Pf6N2E2_1956 0.26 +1.5 2,320,901 + Pf6N2E2_1956 0.26 +2.2 2,320,902 - Pf6N2E2_1956 0.26 +0.4 2,320,928 - Pf6N2E2_1956 0.28 +0.7 2,320,981 + Pf6N2E2_1956 0.33 +0.6 2,320,981 + Pf6N2E2_1956 0.33 +1.6 2,320,982 - Pf6N2E2_1956 0.33 +1.1 2,321,049 - Pf6N2E2_1956 0.39 +0.6 2,321,087 - Pf6N2E2_1956 0.42 -0.1 2,321,102 - Pf6N2E2_1956 0.43 -0.8 2,321,159 + Pf6N2E2_1956 0.48 -2.8 2,321,160 - Pf6N2E2_1956 0.48 -2.0 2,321,160 - Pf6N2E2_1956 0.48 +1.0 2,321,276 - Pf6N2E2_1956 0.59 -0.1 2,321,276 - Pf6N2E2_1956 0.59 +3.1 2,321,419 + Pf6N2E2_1956 0.71 -1.4 2,321,443 + Pf6N2E2_1956 0.73 +1.5 2,321,443 + Pf6N2E2_1956 0.73 -0.6 2,321,443 + Pf6N2E2_1956 0.73 +0.7 2,321,651 - +0.1 2,321,743 + +0.6 2,321,743 + -0.4 2,321,744 - -3.0 2,321,830 + +1.1 2,321,830 + -0.1 2,321,831 - -0.2 2,321,858 - +0.4 2,321,858 - +0.4 2,321,932 - Pf6N2E2_1957 0.14 -0.3 2,322,169 - Pf6N2E2_1957 0.32 +1.6 2,322,206 + Pf6N2E2_1957 0.35 +1.1 2,322,344 + Pf6N2E2_1957 0.45 +0.9 2,322,451 + Pf6N2E2_1957 0.53 +1.1 2,322,484 + Pf6N2E2_1957 0.56 -1.5 2,322,508 + Pf6N2E2_1957 0.58 -0.4 2,322,508 + Pf6N2E2_1957 0.58 +1.7 2,322,611 + Pf6N2E2_1957 0.65 +0.4
Or see this region's nucleotide sequence