Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1164 and Pf6N2E2_1165 are separated by 56 nucleotides
Pf6N2E2_1164 - hypothetical protein, at 1,363,003 to 1,364,856
_1164
Pf6N2E2_1165 - hypothetical protein, at 1,364,913 to 1,365,593
_1165
Position (kb)
1364
1365
1366 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1363.947 kb on - strand, within Pf6N2E2_1164 at 1364.001 kb on - strand, within Pf6N2E2_1164 at 1364.086 kb on + strand, within Pf6N2E2_1164 at 1364.481 kb on - strand, within Pf6N2E2_1164 at 1364.481 kb on - strand, within Pf6N2E2_1164 at 1364.492 kb on + strand, within Pf6N2E2_1164 at 1364.492 kb on + strand, within Pf6N2E2_1164 at 1364.492 kb on + strand, within Pf6N2E2_1164 at 1364.493 kb on - strand at 1364.493 kb on - strand, within Pf6N2E2_1164 at 1364.493 kb on - strand, within Pf6N2E2_1164 at 1364.540 kb on + strand, within Pf6N2E2_1164 at 1364.541 kb on - strand, within Pf6N2E2_1164 at 1364.546 kb on + strand, within Pf6N2E2_1164 at 1364.546 kb on + strand, within Pf6N2E2_1164 at 1364.684 kb on + strand at 1364.727 kb on - strand at 1364.727 kb on - strand at 1364.916 kb on + strand at 1364.916 kb on + strand at 1364.916 kb on + strand at 1364.955 kb on + strand at 1365.174 kb on + strand, within Pf6N2E2_1165 at 1365.308 kb on - strand, within Pf6N2E2_1165 at 1365.414 kb on + strand, within Pf6N2E2_1165 at 1365.414 kb on + strand, within Pf6N2E2_1165 at 1365.415 kb on - strand, within Pf6N2E2_1165 at 1365.415 kb on - strand, within Pf6N2E2_1165 at 1365.509 kb on - strand, within Pf6N2E2_1165 at 1365.515 kb on - strand, within Pf6N2E2_1165 at 1365.593 kb on + strand at 1365.593 kb on + strand at 1365.594 kb on - strand at 1365.600 kb on + strand at 1365.609 kb on - strand at 1365.609 kb on - strand at 1365.609 kb on - strand at 1365.609 kb on - strand at 1365.618 kb on + strand at 1365.619 kb on - strand at 1365.619 kb on - strand at 1365.668 kb on - strand at 1365.668 kb on - strand at 1365.671 kb on - strand at 1365.853 kb on - strand at 1365.888 kb on + strand at 1365.889 kb on - strand at 1365.921 kb on + strand at 1365.932 kb on - strand at 1365.932 kb on - strand at 1365.982 kb on - strand at 1366.176 kb on + strand at 1366.273 kb on + strand at 1366.273 kb on + strand at 1366.401 kb on + strand at 1366.401 kb on + strand at 1366.441 kb on + strand at 1366.442 kb on - strand at 1366.513 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 1,363,947 - Pf6N2E2_1164 0.51 +0.6 1,364,001 - Pf6N2E2_1164 0.54 +1.5 1,364,086 + Pf6N2E2_1164 0.58 +0.3 1,364,481 - Pf6N2E2_1164 0.80 +0.2 1,364,481 - Pf6N2E2_1164 0.80 -2.0 1,364,492 + Pf6N2E2_1164 0.80 -1.0 1,364,492 + Pf6N2E2_1164 0.80 +1.5 1,364,492 + Pf6N2E2_1164 0.80 +0.9 1,364,493 - +0.5 1,364,493 - Pf6N2E2_1164 0.80 -2.5 1,364,493 - Pf6N2E2_1164 0.80 +0.3 1,364,540 + Pf6N2E2_1164 0.83 -0.3 1,364,541 - Pf6N2E2_1164 0.83 -1.8 1,364,546 + Pf6N2E2_1164 0.83 +1.7 1,364,546 + Pf6N2E2_1164 0.83 +1.6 1,364,684 + -0.0 1,364,727 - +0.2 1,364,727 - +0.7 1,364,916 + -0.3 1,364,916 + +0.3 1,364,916 + +0.5 1,364,955 + -1.6 1,365,174 + Pf6N2E2_1165 0.38 -2.1 1,365,308 - Pf6N2E2_1165 0.58 +1.3 1,365,414 + Pf6N2E2_1165 0.74 +1.9 1,365,414 + Pf6N2E2_1165 0.74 +0.8 1,365,415 - Pf6N2E2_1165 0.74 +1.2 1,365,415 - Pf6N2E2_1165 0.74 +2.5 1,365,509 - Pf6N2E2_1165 0.88 -2.5 1,365,515 - Pf6N2E2_1165 0.88 +0.9 1,365,593 + -2.8 1,365,593 + +1.4 1,365,594 - -0.2 1,365,600 + +1.5 1,365,609 - +0.8 1,365,609 - +0.3 1,365,609 - -0.0 1,365,609 - +0.9 1,365,618 + +1.2 1,365,619 - -2.5 1,365,619 - -0.2 1,365,668 - +0.4 1,365,668 - +0.3 1,365,671 - +0.5 1,365,853 - +1.6 1,365,888 + -1.2 1,365,889 - +1.0 1,365,921 + +0.6 1,365,932 - -0.7 1,365,932 - +1.9 1,365,982 - -0.1 1,366,176 + -1.3 1,366,273 + +0.2 1,366,273 + +0.2 1,366,401 + +0.1 1,366,401 + +0.8 1,366,441 + +0.5 1,366,442 - -3.2 1,366,513 + +0.1
Or see this region's nucleotide sequence