Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_695 and Pf1N1B4_696 overlap by 4 nucleotides Pf1N1B4_696 and Pf1N1B4_697 are separated by 159 nucleotides
Pf1N1B4_695 - Aldehyde dehydrogenase (EC 1.2.1.3), at 793,533 to 794,981
_695
Pf1N1B4_696 - Acetolactate synthase, large subunit (EC 2.2.1.6), at 794,978 to 796,615
_696
Pf1N1B4_697 - Glycine cleavage system transcriptional activator, at 796,775 to 797,656
_697
Position (kb) 794
795
796
797 Strain fitness (log2 ratio) -2
-1
0
1
2 at 794.196 kb on + strand, within Pf1N1B4_695 at 794.450 kb on + strand, within Pf1N1B4_695 at 794.457 kb on + strand, within Pf1N1B4_695 at 794.641 kb on + strand at 794.642 kb on - strand, within Pf1N1B4_695 at 794.645 kb on - strand, within Pf1N1B4_695 at 794.645 kb on - strand, within Pf1N1B4_695 at 794.950 kb on + strand at 794.950 kb on + strand at 794.950 kb on + strand at 794.951 kb on - strand at 794.951 kb on - strand at 794.951 kb on - strand at 794.966 kb on + strand at 795.141 kb on + strand at 795.141 kb on + strand at 795.141 kb on + strand at 795.141 kb on + strand at 795.141 kb on + strand at 795.141 kb on + strand at 795.141 kb on + strand at 795.142 kb on - strand, within Pf1N1B4_696 at 795.142 kb on - strand, within Pf1N1B4_696 at 795.183 kb on + strand, within Pf1N1B4_696 at 795.183 kb on + strand, within Pf1N1B4_696 at 795.183 kb on + strand, within Pf1N1B4_696 at 795.183 kb on + strand, within Pf1N1B4_696 at 795.183 kb on + strand, within Pf1N1B4_696 at 795.183 kb on + strand, within Pf1N1B4_696 at 795.184 kb on - strand, within Pf1N1B4_696 at 795.184 kb on - strand, within Pf1N1B4_696 at 795.184 kb on - strand, within Pf1N1B4_696 at 795.184 kb on - strand, within Pf1N1B4_696 at 795.184 kb on - strand, within Pf1N1B4_696 at 795.184 kb on - strand, within Pf1N1B4_696 at 795.202 kb on - strand, within Pf1N1B4_696 at 795.453 kb on + strand, within Pf1N1B4_696 at 795.701 kb on - strand, within Pf1N1B4_696 at 796.356 kb on + strand, within Pf1N1B4_696 at 796.356 kb on + strand, within Pf1N1B4_696 at 796.583 kb on + strand at 796.595 kb on + strand at 796.595 kb on + strand at 796.595 kb on + strand at 796.595 kb on + strand at 796.595 kb on + strand at 796.595 kb on + strand at 796.596 kb on - strand at 796.596 kb on - strand at 796.596 kb on - strand at 796.663 kb on + strand at 796.663 kb on + strand at 796.664 kb on - strand at 796.664 kb on - strand at 796.664 kb on - strand at 796.729 kb on + strand at 796.739 kb on + strand at 796.740 kb on - strand at 796.740 kb on - strand at 796.742 kb on + strand at 796.743 kb on - strand at 796.743 kb on - strand at 796.761 kb on + strand at 796.762 kb on - strand at 796.762 kb on - strand at 796.762 kb on - strand at 796.762 kb on - strand at 796.919 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.205 kb on - strand, within Pf1N1B4_697 at 797.567 kb on + strand, within Pf1N1B4_697 at 797.570 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 794,196 + Pf1N1B4_695 0.46 +1.0 794,450 + Pf1N1B4_695 0.63 +0.8 794,457 + Pf1N1B4_695 0.64 +1.0 794,641 + -1.0 794,642 - Pf1N1B4_695 0.77 +1.0 794,645 - Pf1N1B4_695 0.77 -1.3 794,645 - Pf1N1B4_695 0.77 +0.0 794,950 + +0.7 794,950 + +1.3 794,950 + +1.0 794,951 - +0.9 794,951 - -0.6 794,951 - +0.8 794,966 + +1.6 795,141 + +1.2 795,141 + -1.4 795,141 + +0.0 795,141 + +1.6 795,141 + +1.4 795,141 + +0.8 795,141 + -0.9 795,142 - Pf1N1B4_696 0.10 +2.0 795,142 - Pf1N1B4_696 0.10 +0.2 795,183 + Pf1N1B4_696 0.13 -1.3 795,183 + Pf1N1B4_696 0.13 -1.0 795,183 + Pf1N1B4_696 0.13 +0.7 795,183 + Pf1N1B4_696 0.13 +1.6 795,183 + Pf1N1B4_696 0.13 +1.8 795,183 + Pf1N1B4_696 0.13 +0.0 795,184 - Pf1N1B4_696 0.13 +1.2 795,184 - Pf1N1B4_696 0.13 +1.2 795,184 - Pf1N1B4_696 0.13 +1.3 795,184 - Pf1N1B4_696 0.13 +1.6 795,184 - Pf1N1B4_696 0.13 -2.6 795,184 - Pf1N1B4_696 0.13 +1.2 795,202 - Pf1N1B4_696 0.14 +1.4 795,453 + Pf1N1B4_696 0.29 +0.2 795,701 - Pf1N1B4_696 0.44 +0.4 796,356 + Pf1N1B4_696 0.84 -0.6 796,356 + Pf1N1B4_696 0.84 +0.2 796,583 + +0.4 796,595 + +0.0 796,595 + +0.9 796,595 + +0.0 796,595 + -2.3 796,595 + +1.3 796,595 + +0.3 796,596 - +0.0 796,596 - -0.2 796,596 - +1.0 796,663 + -0.3 796,663 + +0.5 796,664 - -0.3 796,664 - -1.7 796,664 - -1.0 796,729 + -0.4 796,739 + +0.6 796,740 - +1.0 796,740 - -0.4 796,742 + -0.4 796,743 - +0.0 796,743 - +0.3 796,761 + -1.2 796,762 - +1.6 796,762 - -0.7 796,762 - +1.0 796,762 - -1.0 796,919 + Pf1N1B4_697 0.16 +0.5 797,204 + Pf1N1B4_697 0.49 +0.0 797,204 + Pf1N1B4_697 0.49 +0.0 797,204 + Pf1N1B4_697 0.49 +1.0 797,204 + Pf1N1B4_697 0.49 +0.8 797,204 + Pf1N1B4_697 0.49 +0.0 797,204 + Pf1N1B4_697 0.49 -0.4 797,204 + Pf1N1B4_697 0.49 +0.8 797,204 + Pf1N1B4_697 0.49 -0.6 797,204 + Pf1N1B4_697 0.49 +1.2 797,204 + Pf1N1B4_697 0.49 +0.6 797,205 - Pf1N1B4_697 0.49 +0.3 797,567 + Pf1N1B4_697 0.90 -2.3 797,570 + -0.5
Or see this region's nucleotide sequence