Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_5954 and Pf1N1B4_5955 are separated by 411 nucleotides Pf1N1B4_5955 and Pf1N1B4_5956 are separated by 9 nucleotides
Pf1N1B4_5954 - hypothetical protein, at 402,482 to 403,000
_5954
Pf1N1B4_5955 - Permease of the major facilitator superfamily, at 403,412 to 404,641
_5955
Pf1N1B4_5956 - NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12), at 404,651 to 405,703
_5956
Position (kb) 403
404
405 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 402.483 kb on + strand at 402.483 kb on + strand at 402.484 kb on - strand at 402.496 kb on - strand at 402.623 kb on + strand, within Pf1N1B4_5954 at 402.705 kb on - strand, within Pf1N1B4_5954 at 402.722 kb on + strand, within Pf1N1B4_5954 at 402.722 kb on + strand, within Pf1N1B4_5954 at 402.722 kb on + strand at 402.722 kb on + strand, within Pf1N1B4_5954 at 402.723 kb on - strand, within Pf1N1B4_5954 at 402.774 kb on + strand, within Pf1N1B4_5954 at 402.925 kb on - strand, within Pf1N1B4_5954 at 402.970 kb on - strand at 403.003 kb on - strand at 403.578 kb on + strand, within Pf1N1B4_5955 at 403.578 kb on + strand, within Pf1N1B4_5955 at 403.578 kb on + strand, within Pf1N1B4_5955 at 403.920 kb on + strand, within Pf1N1B4_5955 at 403.920 kb on + strand, within Pf1N1B4_5955 at 404.220 kb on + strand, within Pf1N1B4_5955 at 404.220 kb on + strand, within Pf1N1B4_5955 at 404.221 kb on - strand, within Pf1N1B4_5955 at 404.475 kb on + strand at 404.476 kb on - strand, within Pf1N1B4_5955 at 404.476 kb on - strand, within Pf1N1B4_5955 at 404.476 kb on - strand at 404.476 kb on - strand, within Pf1N1B4_5955 at 404.581 kb on - strand at 404.581 kb on - strand at 404.602 kb on - strand at 404.727 kb on + strand at 404.727 kb on + strand at 404.727 kb on + strand at 404.728 kb on - strand at 404.728 kb on - strand at 404.728 kb on - strand at 404.728 kb on - strand at 405.334 kb on - strand, within Pf1N1B4_5956
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 402,483 + +0.1 402,483 + -0.2 402,484 - +0.6 402,496 - -0.4 402,623 + Pf1N1B4_5954 0.27 -0.4 402,705 - Pf1N1B4_5954 0.43 +1.2 402,722 + Pf1N1B4_5954 0.46 +1.6 402,722 + Pf1N1B4_5954 0.46 -1.7 402,722 + -0.4 402,722 + Pf1N1B4_5954 0.46 -0.3 402,723 - Pf1N1B4_5954 0.46 -0.5 402,774 + Pf1N1B4_5954 0.56 -0.8 402,925 - Pf1N1B4_5954 0.85 -0.4 402,970 - +1.3 403,003 - -1.4 403,578 + Pf1N1B4_5955 0.13 -0.1 403,578 + Pf1N1B4_5955 0.13 -2.7 403,578 + Pf1N1B4_5955 0.13 -0.4 403,920 + Pf1N1B4_5955 0.41 +2.4 403,920 + Pf1N1B4_5955 0.41 -0.4 404,220 + Pf1N1B4_5955 0.66 -0.4 404,220 + Pf1N1B4_5955 0.66 +0.6 404,221 - Pf1N1B4_5955 0.66 -2.9 404,475 + -0.4 404,476 - Pf1N1B4_5955 0.87 -0.6 404,476 - Pf1N1B4_5955 0.87 -2.0 404,476 - +1.0 404,476 - Pf1N1B4_5955 0.87 -2.4 404,581 - -2.4 404,581 - -0.1 404,602 - -0.0 404,727 + -3.4 404,727 + +1.2 404,727 + +0.6 404,728 - -0.4 404,728 - -0.8 404,728 - +1.6 404,728 - -0.4 405,334 - Pf1N1B4_5956 0.65 -0.4
Or see this region's nucleotide sequence