Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5073
Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,617,711 | + | +2.0 | |||
5,617,954 | - | Pf1N1B4_5072 | 0.23 | -1.9 | |
5,618,094 | + | Pf1N1B4_5072 | 0.40 | -1.1 | |
5,618,133 | + | Pf1N1B4_5072 | 0.45 | -0.8 | |
5,618,136 | - | Pf1N1B4_5072 | 0.45 | +0.3 | |
5,618,457 | + | Pf1N1B4_5072 | 0.85 | -1.2 | |
5,618,458 | - | Pf1N1B4_5072 | 0.85 | +0.5 | |
5,618,580 | + | -0.5 | |||
5,618,581 | - | -0.9 | |||
5,618,635 | - | +1.1 | |||
5,618,673 | - | Pf1N1B4_5073 | 0.11 | -0.5 | |
5,618,709 | - | Pf1N1B4_5073 | 0.16 | -1.1 | |
5,618,709 | - | +0.1 | |||
5,618,764 | - | Pf1N1B4_5073 | 0.23 | -1.7 | |
5,619,005 | + | +0.5 | |||
5,619,092 | + | Pf1N1B4_5073 | 0.64 | -0.6 | |
5,619,093 | - | +0.5 | |||
5,619,117 | + | Pf1N1B4_5073 | 0.68 | -0.9 | |
5,619,269 | + | Pf1N1B4_5073 | 0.87 | +0.1 | |
5,619,379 | + | +0.5 | |||
5,619,379 | + | -1.5 | |||
5,619,380 | - | -0.5 | |||
5,619,380 | - | -0.2 | |||
5,619,380 | - | +0.4 | |||
5,619,380 | - | +0.9 | |||
5,619,380 | - | -2.1 | |||
5,619,380 | - | -1.5 | |||
5,619,380 | - | -1.5 | |||
5,619,380 | - | -1.8 | |||
5,619,383 | + | +0.5 | |||
5,619,383 | + | +1.7 | |||
5,619,383 | + | +0.1 | |||
5,619,384 | - | -0.5 | |||
5,619,384 | - | +0.1 | |||
5,619,455 | + | +2.3 | |||
5,619,511 | + | +0.5 | |||
5,619,512 | - | +0.5 | |||
5,619,955 | + | +0.5 | |||
5,620,299 | + | Pf1N1B4_5074 | 0.58 | +0.6 | |
5,620,300 | - | -1.8 |
Or see this region's nucleotide sequence