Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4830
Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 5,333,294 | + | -0.7 | |||
| 5,333,360 | + | Pf1N1B4_4829 | 0.12 | +0.1 | |
| 5,333,360 | + | +1.8 | |||
| 5,333,361 | - | -0.5 | |||
| 5,334,000 | + | Pf1N1B4_4829 | 0.76 | +1.5 | |
| 5,334,000 | + | Pf1N1B4_4829 | 0.76 | -0.5 | |
| 5,334,001 | - | Pf1N1B4_4829 | 0.76 | +1.3 | |
| 5,334,001 | - | Pf1N1B4_4829 | 0.76 | +0.9 | |
| 5,334,283 | - | +0.1 | |||
| 5,334,291 | + | -1.5 | |||
| 5,334,291 | + | +0.8 | |||
| 5,334,291 | + | +0.3 | |||
| 5,334,292 | - | +0.5 | |||
| 5,334,292 | - | -0.5 | |||
| 5,334,292 | - | -1.0 | |||
| 5,334,765 | - | Pf1N1B4_4830 | 0.42 | +1.1 | |
| 5,335,268 | - | -0.5 | |||
| 5,335,270 | - | Pf1N1B4_4830 | 0.87 | +2.0 | |
| 5,335,297 | - | Pf1N1B4_4830 | 0.89 | -0.5 | |
| 5,335,616 | + | Pf1N1B4_4831 | 0.13 | +1.7 | |
| 5,335,616 | + | Pf1N1B4_4831 | 0.13 | +0.1 | |
| 5,335,617 | - | Pf1N1B4_4831 | 0.13 | +0.2 | |
| 5,335,864 | - | Pf1N1B4_4831 | 0.30 | -0.5 | |
| 5,336,218 | + | Pf1N1B4_4831 | 0.54 | -0.5 | |
| 5,336,219 | - | Pf1N1B4_4831 | 0.54 | -1.1 |
Or see this region's nucleotide sequence