Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4559 and Pf1N1B4_4560 are separated by 129 nucleotides Pf1N1B4_4560 and Pf1N1B4_4561 are separated by 184 nucleotides
Pf1N1B4_4559 - Predicted exporter of the RND superfamily, at 5,028,595 to 5,031,210
_4559
Pf1N1B4_4560 - Transcriptional regulator, MerR family, at 5,031,340 to 5,031,723
_4560
Pf1N1B4_4561 - Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17), at 5,031,908 to 5,032,483
_4561
Position (kb) 5031
5032 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5030.645 kb on - strand, within Pf1N1B4_4559 at 5030.645 kb on - strand, within Pf1N1B4_4559 at 5030.645 kb on - strand, within Pf1N1B4_4559 at 5030.645 kb on - strand, within Pf1N1B4_4559 at 5030.734 kb on + strand, within Pf1N1B4_4559 at 5030.735 kb on - strand, within Pf1N1B4_4559 at 5030.811 kb on + strand, within Pf1N1B4_4559 at 5030.811 kb on + strand, within Pf1N1B4_4559 at 5030.811 kb on + strand, within Pf1N1B4_4559 at 5030.811 kb on + strand, within Pf1N1B4_4559 at 5030.811 kb on + strand at 5030.815 kb on + strand at 5030.815 kb on + strand, within Pf1N1B4_4559 at 5030.815 kb on + strand, within Pf1N1B4_4559 at 5031.084 kb on - strand at 5031.186 kb on - strand at 5031.209 kb on - strand at 5031.302 kb on - strand at 5031.351 kb on + strand at 5031.477 kb on + strand, within Pf1N1B4_4560 at 5031.477 kb on + strand, within Pf1N1B4_4560 at 5031.477 kb on + strand, within Pf1N1B4_4560 at 5031.611 kb on + strand, within Pf1N1B4_4560 at 5031.611 kb on + strand, within Pf1N1B4_4560 at 5031.719 kb on + strand at 5031.720 kb on - strand at 5031.791 kb on + strand at 5031.843 kb on - strand at 5032.074 kb on + strand, within Pf1N1B4_4561 at 5032.075 kb on - strand, within Pf1N1B4_4561 at 5032.075 kb on - strand, within Pf1N1B4_4561 at 5032.077 kb on + strand, within Pf1N1B4_4561 at 5032.335 kb on - strand, within Pf1N1B4_4561 at 5032.410 kb on + strand, within Pf1N1B4_4561 at 5032.410 kb on + strand, within Pf1N1B4_4561 at 5032.410 kb on + strand, within Pf1N1B4_4561 at 5032.410 kb on + strand, within Pf1N1B4_4561 at 5032.410 kb on + strand, within Pf1N1B4_4561 at 5032.411 kb on - strand at 5032.411 kb on - strand, within Pf1N1B4_4561 at 5032.411 kb on - strand, within Pf1N1B4_4561 at 5032.414 kb on + strand, within Pf1N1B4_4561 at 5032.415 kb on - strand, within Pf1N1B4_4561 at 5032.439 kb on - strand at 5032.583 kb on - strand at 5032.635 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,030,645 - Pf1N1B4_4559 0.78 +0.6 5,030,645 - Pf1N1B4_4559 0.78 +1.6 5,030,645 - Pf1N1B4_4559 0.78 +0.6 5,030,645 - Pf1N1B4_4559 0.78 +0.3 5,030,734 + Pf1N1B4_4559 0.82 -2.5 5,030,735 - Pf1N1B4_4559 0.82 -0.9 5,030,811 + Pf1N1B4_4559 0.85 -0.5 5,030,811 + Pf1N1B4_4559 0.85 +1.9 5,030,811 + Pf1N1B4_4559 0.85 -0.7 5,030,811 + Pf1N1B4_4559 0.85 +0.5 5,030,811 + +0.5 5,030,815 + -0.5 5,030,815 + Pf1N1B4_4559 0.85 +1.1 5,030,815 + Pf1N1B4_4559 0.85 +1.1 5,031,084 - +0.1 5,031,186 - -0.5 5,031,209 - -1.5 5,031,302 - -0.0 5,031,351 + +0.3 5,031,477 + Pf1N1B4_4560 0.36 +1.5 5,031,477 + Pf1N1B4_4560 0.36 +0.8 5,031,477 + Pf1N1B4_4560 0.36 +0.1 5,031,611 + Pf1N1B4_4560 0.71 -0.9 5,031,611 + Pf1N1B4_4560 0.71 +0.5 5,031,719 + -0.2 5,031,720 - +0.5 5,031,791 + +1.4 5,031,843 - -1.8 5,032,074 + Pf1N1B4_4561 0.29 +2.4 5,032,075 - Pf1N1B4_4561 0.29 -0.4 5,032,075 - Pf1N1B4_4561 0.29 -0.4 5,032,077 + Pf1N1B4_4561 0.29 -1.4 5,032,335 - Pf1N1B4_4561 0.74 +0.4 5,032,410 + Pf1N1B4_4561 0.87 +0.9 5,032,410 + Pf1N1B4_4561 0.87 +2.1 5,032,410 + Pf1N1B4_4561 0.87 +0.6 5,032,410 + Pf1N1B4_4561 0.87 +0.5 5,032,410 + Pf1N1B4_4561 0.87 +0.4 5,032,411 - +1.6 5,032,411 - Pf1N1B4_4561 0.87 -1.3 5,032,411 - Pf1N1B4_4561 0.87 -2.0 5,032,414 + Pf1N1B4_4561 0.88 -2.8 5,032,415 - Pf1N1B4_4561 0.88 -2.0 5,032,439 - +0.1 5,032,583 - +0.1 5,032,635 - +2.3
Or see this region's nucleotide sequence