Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4551 and Pf1N1B4_4552 overlap by 4 nucleotides Pf1N1B4_4552 and Pf1N1B4_4553 are separated by 46 nucleotides
Pf1N1B4_4551 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179), at 5,019,458 to 5,020,723
_4551
Pf1N1B4_4552 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41), at 5,020,720 to 5,021,940
_4552
Pf1N1B4_4553 - FIG00959354: hypothetical protein, at 5,021,987 to 5,024,857
_4553
Position (kb) 5020
5021
5022 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5020.076 kb on + strand at 5020.268 kb on + strand, within Pf1N1B4_4551 at 5020.559 kb on - strand, within Pf1N1B4_4551 at 5020.610 kb on + strand at 5020.610 kb on + strand at 5020.706 kb on + strand at 5020.707 kb on - strand at 5020.707 kb on - strand at 5020.708 kb on + strand at 5020.709 kb on - strand at 5021.205 kb on + strand, within Pf1N1B4_4552 at 5021.205 kb on + strand, within Pf1N1B4_4552 at 5021.205 kb on + strand, within Pf1N1B4_4552 at 5021.260 kb on + strand, within Pf1N1B4_4552 at 5021.260 kb on + strand at 5021.260 kb on + strand, within Pf1N1B4_4552 at 5021.260 kb on + strand, within Pf1N1B4_4552 at 5021.260 kb on + strand, within Pf1N1B4_4552 at 5021.261 kb on - strand, within Pf1N1B4_4552 at 5021.340 kb on + strand, within Pf1N1B4_4552 at 5021.341 kb on - strand, within Pf1N1B4_4552 at 5021.600 kb on + strand, within Pf1N1B4_4552 at 5021.679 kb on + strand, within Pf1N1B4_4552 at 5021.679 kb on + strand, within Pf1N1B4_4552 at 5021.680 kb on - strand at 5021.680 kb on - strand, within Pf1N1B4_4552 at 5021.680 kb on - strand, within Pf1N1B4_4552 at 5021.999 kb on - strand at 5022.077 kb on - strand at 5022.086 kb on + strand at 5022.786 kb on + strand, within Pf1N1B4_4553 at 5022.881 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,020,076 + -0.4 5,020,268 + Pf1N1B4_4551 0.64 -0.1 5,020,559 - Pf1N1B4_4551 0.87 +0.2 5,020,610 + -0.4 5,020,610 + -1.8 5,020,706 + -0.4 5,020,707 - -1.0 5,020,707 - +0.0 5,020,708 + +0.4 5,020,709 - -0.2 5,021,205 + Pf1N1B4_4552 0.40 +1.4 5,021,205 + Pf1N1B4_4552 0.40 +1.0 5,021,205 + Pf1N1B4_4552 0.40 +0.8 5,021,260 + Pf1N1B4_4552 0.44 +1.3 5,021,260 + -0.4 5,021,260 + Pf1N1B4_4552 0.44 +0.9 5,021,260 + Pf1N1B4_4552 0.44 -1.4 5,021,260 + Pf1N1B4_4552 0.44 +1.6 5,021,261 - Pf1N1B4_4552 0.44 +0.1 5,021,340 + Pf1N1B4_4552 0.51 -0.0 5,021,341 - Pf1N1B4_4552 0.51 +0.4 5,021,600 + Pf1N1B4_4552 0.72 +0.9 5,021,679 + Pf1N1B4_4552 0.79 +0.8 5,021,679 + Pf1N1B4_4552 0.79 -0.2 5,021,680 - +0.1 5,021,680 - Pf1N1B4_4552 0.79 +0.6 5,021,680 - Pf1N1B4_4552 0.79 +2.4 5,021,999 - -1.4 5,022,077 - +0.4 5,022,086 + +0.1 5,022,786 + Pf1N1B4_4553 0.28 -0.4 5,022,881 + +0.6
Or see this region's nucleotide sequence