Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4429
Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,888,391 | + | Pf1N1B4_4427 | 0.88 | +0.8 | |
4,888,395 | + | Pf1N1B4_4427 | 0.89 | +1.2 | |
4,888,395 | + | Pf1N1B4_4427 | 0.89 | +0.9 | |
4,888,763 | - | Pf1N1B4_4428 | 0.35 | +2.2 | |
4,889,305 | + | +0.2 | |||
4,889,556 | + | Pf1N1B4_4429 | 0.39 | -1.0 | |
4,889,557 | - | Pf1N1B4_4429 | 0.39 | -0.2 | |
4,889,649 | + | Pf1N1B4_4429 | 0.54 | -0.7 | |
4,889,649 | + | Pf1N1B4_4429 | 0.54 | -1.4 | |
4,889,649 | + | Pf1N1B4_4429 | 0.54 | +0.2 | |
4,889,877 | + | -0.1 | |||
4,889,877 | + | -0.3 | |||
4,889,878 | - | -0.1 | |||
4,889,878 | - | -2.0 | |||
4,889,914 | - | +1.7 | |||
4,890,185 | - | -0.4 | |||
4,890,185 | - | -0.1 | |||
4,890,274 | - | Pf1N1B4_4430 | 0.13 | +2.6 | |
4,890,292 | + | Pf1N1B4_4430 | 0.14 | +0.6 | |
4,890,293 | - | Pf1N1B4_4430 | 0.14 | +1.6 | |
4,890,555 | - | Pf1N1B4_4430 | 0.23 | +1.2 | |
4,890,860 | + | Pf1N1B4_4430 | 0.34 | -0.2 |
Or see this region's nucleotide sequence