Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4376 and Pf1N1B4_4377 are separated by 189 nucleotides Pf1N1B4_4377 and Pf1N1B4_4378 are separated by 321 nucleotides
Pf1N1B4_4376 - probable transmembrane protein, at 4,833,146 to 4,833,997
_4376
Pf1N1B4_4377 - Cell wall hydrolyses involved in spore germination, at 4,834,187 to 4,834,807
_4377
Pf1N1B4_4378 - Kup system potassium uptake protein, at 4,835,129 to 4,837,030
_4378
Position (kb)
4834
4835 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4833.402 kb on + strand at 4833.402 kb on + strand, within Pf1N1B4_4376 at 4833.402 kb on + strand, within Pf1N1B4_4376 at 4833.406 kb on + strand, within Pf1N1B4_4376 at 4833.406 kb on + strand, within Pf1N1B4_4376 at 4833.406 kb on + strand at 4833.407 kb on - strand, within Pf1N1B4_4376 at 4833.407 kb on - strand, within Pf1N1B4_4376 at 4833.407 kb on - strand, within Pf1N1B4_4376 at 4833.407 kb on - strand, within Pf1N1B4_4376 at 4834.081 kb on + strand at 4834.082 kb on - strand at 4834.082 kb on - strand at 4834.082 kb on - strand at 4834.115 kb on - strand at 4834.137 kb on - strand at 4834.196 kb on - strand at 4834.203 kb on + strand at 4834.439 kb on + strand, within Pf1N1B4_4377 at 4834.440 kb on - strand, within Pf1N1B4_4377 at 4834.628 kb on + strand, within Pf1N1B4_4377 at 4834.700 kb on + strand, within Pf1N1B4_4377 at 4834.701 kb on - strand, within Pf1N1B4_4377 at 4834.778 kb on + strand at 4834.779 kb on - strand at 4834.849 kb on + strand at 4834.858 kb on - strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.954 kb on + strand at 4834.954 kb on + strand at 4834.954 kb on + strand at 4834.954 kb on + strand at 4835.357 kb on + strand at 4835.357 kb on + strand, within Pf1N1B4_4378 at 4835.358 kb on - strand, within Pf1N1B4_4378 at 4835.358 kb on - strand, within Pf1N1B4_4378 at 4835.632 kb on - strand, within Pf1N1B4_4378 at 4835.718 kb on - strand, within Pf1N1B4_4378
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,833,402 + +1.6 4,833,402 + Pf1N1B4_4376 0.30 -0.4 4,833,402 + Pf1N1B4_4376 0.30 -0.1 4,833,406 + Pf1N1B4_4376 0.31 -0.1 4,833,406 + Pf1N1B4_4376 0.31 -0.4 4,833,406 + -0.0 4,833,407 - Pf1N1B4_4376 0.31 +1.2 4,833,407 - Pf1N1B4_4376 0.31 +0.5 4,833,407 - Pf1N1B4_4376 0.31 +0.3 4,833,407 - Pf1N1B4_4376 0.31 +0.2 4,834,081 + -0.7 4,834,082 - +0.3 4,834,082 - -0.4 4,834,082 - -0.4 4,834,115 - -0.4 4,834,137 - -1.2 4,834,196 - +0.3 4,834,203 + +1.8 4,834,439 + Pf1N1B4_4377 0.41 +1.2 4,834,440 - Pf1N1B4_4377 0.41 +0.6 4,834,628 + Pf1N1B4_4377 0.71 -0.2 4,834,700 + Pf1N1B4_4377 0.83 +1.2 4,834,701 - Pf1N1B4_4377 0.83 +0.5 4,834,778 + +1.2 4,834,779 - -0.4 4,834,849 + +0.2 4,834,858 - +2.5 4,834,922 + +1.2 4,834,922 + -0.6 4,834,922 + -1.0 4,834,954 + -0.8 4,834,954 + +0.6 4,834,954 + -0.0 4,834,954 + -0.3 4,835,357 + -0.8 4,835,357 + Pf1N1B4_4378 0.12 -0.4 4,835,358 - Pf1N1B4_4378 0.12 +2.2 4,835,358 - Pf1N1B4_4378 0.12 -0.1 4,835,632 - Pf1N1B4_4378 0.26 -2.0 4,835,718 - Pf1N1B4_4378 0.31 -0.4
Or see this region's nucleotide sequence