Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4248 and Pf1N1B4_4249 are separated by 111 nucleotides Pf1N1B4_4249 and Pf1N1B4_4250 are separated by 126 nucleotides
Pf1N1B4_4248 - Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2), at 4,710,099 to 4,711,202
_4248
Pf1N1B4_4249 - transcriptional regulator, LuxR family, at 4,711,314 to 4,712,087
_4249
Pf1N1B4_4250 - Methyltransferase (EC 2.1.1.-), at 4,712,214 to 4,713,116
_4250
Position (kb)
4711
4712
4713 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4710.320 kb on - strand, within Pf1N1B4_4248 at 4710.544 kb on + strand, within Pf1N1B4_4248 at 4710.593 kb on - strand at 4710.823 kb on + strand, within Pf1N1B4_4248 at 4711.090 kb on + strand, within Pf1N1B4_4248 at 4711.097 kb on - strand at 4711.551 kb on + strand, within Pf1N1B4_4249 at 4711.551 kb on + strand, within Pf1N1B4_4249 at 4711.650 kb on + strand, within Pf1N1B4_4249 at 4711.650 kb on + strand, within Pf1N1B4_4249 at 4711.650 kb on + strand, within Pf1N1B4_4249 at 4711.650 kb on + strand, within Pf1N1B4_4249 at 4711.653 kb on + strand, within Pf1N1B4_4249 at 4711.653 kb on + strand, within Pf1N1B4_4249 at 4711.653 kb on + strand, within Pf1N1B4_4249 at 4711.662 kb on + strand at 4711.663 kb on - strand, within Pf1N1B4_4249 at 4711.663 kb on - strand, within Pf1N1B4_4249 at 4711.985 kb on + strand, within Pf1N1B4_4249 at 4711.985 kb on + strand, within Pf1N1B4_4249 at 4712.036 kb on + strand at 4712.036 kb on + strand at 4712.036 kb on + strand at 4712.037 kb on - strand at 4712.037 kb on - strand at 4712.123 kb on + strand at 4712.123 kb on + strand at 4712.123 kb on + strand at 4712.123 kb on + strand at 4712.150 kb on - strand at 4712.370 kb on - strand, within Pf1N1B4_4250 at 4712.370 kb on - strand, within Pf1N1B4_4250 at 4712.370 kb on - strand, within Pf1N1B4_4250 at 4712.684 kb on - strand, within Pf1N1B4_4250 at 4712.875 kb on + strand, within Pf1N1B4_4250
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,710,320 - Pf1N1B4_4248 0.20 +1.9 4,710,544 + Pf1N1B4_4248 0.40 -0.0 4,710,593 - +0.6 4,710,823 + Pf1N1B4_4248 0.66 +0.1 4,711,090 + Pf1N1B4_4248 0.90 +0.6 4,711,097 - -0.6 4,711,551 + Pf1N1B4_4249 0.31 -0.4 4,711,551 + Pf1N1B4_4249 0.31 +0.9 4,711,650 + Pf1N1B4_4249 0.43 +2.6 4,711,650 + Pf1N1B4_4249 0.43 +1.9 4,711,650 + Pf1N1B4_4249 0.43 +0.2 4,711,650 + Pf1N1B4_4249 0.43 +0.6 4,711,653 + Pf1N1B4_4249 0.44 +1.0 4,711,653 + Pf1N1B4_4249 0.44 +0.2 4,711,653 + Pf1N1B4_4249 0.44 +0.8 4,711,662 + -1.4 4,711,663 - Pf1N1B4_4249 0.45 +0.2 4,711,663 - Pf1N1B4_4249 0.45 -0.4 4,711,985 + Pf1N1B4_4249 0.87 +2.4 4,711,985 + Pf1N1B4_4249 0.87 -2.0 4,712,036 + +0.3 4,712,036 + +1.0 4,712,036 + -2.0 4,712,037 - +0.6 4,712,037 - +0.6 4,712,123 + +0.6 4,712,123 + +1.1 4,712,123 + -1.8 4,712,123 + +1.2 4,712,150 - +2.6 4,712,370 - Pf1N1B4_4250 0.17 -0.4 4,712,370 - Pf1N1B4_4250 0.17 -0.4 4,712,370 - Pf1N1B4_4250 0.17 +1.2 4,712,684 - Pf1N1B4_4250 0.52 +1.9 4,712,875 + Pf1N1B4_4250 0.73 -0.7
Or see this region's nucleotide sequence