Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
Pf1N1B4_4190 - transcriptional regulator, AraC family, at 4,641,410 to 4,642,603
_4190
Position (kb)
4641
4642
4643 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4640.465 kb on + strand at 4640.466 kb on - strand at 4640.676 kb on - strand at 4640.841 kb on - strand at 4640.841 kb on - strand at 4640.938 kb on + strand at 4640.939 kb on - strand at 4640.939 kb on - strand at 4640.939 kb on - strand at 4640.985 kb on + strand at 4641.097 kb on + strand at 4641.170 kb on - strand at 4641.254 kb on + strand at 4641.304 kb on - strand at 4641.324 kb on + strand at 4641.446 kb on + strand at 4641.446 kb on + strand at 4641.569 kb on + strand, within Pf1N1B4_4190 at 4641.569 kb on + strand, within Pf1N1B4_4190 at 4641.570 kb on - strand at 4641.632 kb on - strand at 4641.632 kb on - strand, within Pf1N1B4_4190 at 4641.723 kb on + strand, within Pf1N1B4_4190 at 4641.724 kb on - strand, within Pf1N1B4_4190 at 4641.728 kb on + strand at 4641.729 kb on - strand, within Pf1N1B4_4190 at 4641.868 kb on + strand, within Pf1N1B4_4190 at 4641.868 kb on + strand, within Pf1N1B4_4190 at 4641.872 kb on + strand at 4641.872 kb on + strand, within Pf1N1B4_4190 at 4641.872 kb on + strand, within Pf1N1B4_4190 at 4641.873 kb on - strand, within Pf1N1B4_4190 at 4641.873 kb on - strand, within Pf1N1B4_4190 at 4641.873 kb on - strand, within Pf1N1B4_4190 at 4641.873 kb on - strand, within Pf1N1B4_4190 at 4642.136 kb on + strand at 4642.137 kb on - strand, within Pf1N1B4_4190 at 4642.151 kb on - strand at 4642.201 kb on - strand, within Pf1N1B4_4190 at 4642.320 kb on + strand, within Pf1N1B4_4190 at 4642.320 kb on + strand, within Pf1N1B4_4190 at 4642.320 kb on + strand, within Pf1N1B4_4190 at 4642.320 kb on + strand, within Pf1N1B4_4190 at 4642.321 kb on - strand, within Pf1N1B4_4190 at 4642.321 kb on - strand, within Pf1N1B4_4190 at 4642.350 kb on + strand, within Pf1N1B4_4190 at 4642.458 kb on - strand, within Pf1N1B4_4190 at 4642.595 kb on + strand at 4642.654 kb on + strand at 4642.654 kb on + strand at 4642.654 kb on + strand at 4642.654 kb on + strand at 4642.655 kb on - strand at 4642.717 kb on + strand at 4642.717 kb on + strand at 4642.718 kb on - strand at 4642.718 kb on - strand at 4642.718 kb on - strand at 4642.736 kb on + strand at 4642.864 kb on + strand at 4642.865 kb on - strand at 4642.951 kb on + strand at 4642.977 kb on + strand at 4643.000 kb on + strand at 4643.001 kb on - strand at 4643.015 kb on + strand at 4643.016 kb on - strand at 4643.048 kb on - strand at 4643.068 kb on - strand at 4643.129 kb on + strand at 4643.197 kb on - strand at 4643.197 kb on - strand at 4643.402 kb on - strand at 4643.425 kb on - strand at 4643.502 kb on + strand at 4643.502 kb on + strand at 4643.502 kb on + strand at 4643.502 kb on + strand at 4643.503 kb on - strand at 4643.534 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,640,465 + -0.4 4,640,466 - +0.1 4,640,676 - +1.2 4,640,841 - +0.2 4,640,841 - -1.4 4,640,938 + -1.2 4,640,939 - +0.8 4,640,939 - -0.1 4,640,939 - +0.1 4,640,985 + -0.9 4,641,097 + -0.8 4,641,170 - +0.6 4,641,254 + +0.1 4,641,304 - +0.1 4,641,324 + -0.4 4,641,446 + +0.2 4,641,446 + -0.1 4,641,569 + Pf1N1B4_4190 0.13 +0.6 4,641,569 + Pf1N1B4_4190 0.13 -0.6 4,641,570 - +0.6 4,641,632 - +1.6 4,641,632 - Pf1N1B4_4190 0.19 +0.6 4,641,723 + Pf1N1B4_4190 0.26 +0.4 4,641,724 - Pf1N1B4_4190 0.26 +1.1 4,641,728 + +1.0 4,641,729 - Pf1N1B4_4190 0.27 +1.6 4,641,868 + Pf1N1B4_4190 0.38 -0.0 4,641,868 + Pf1N1B4_4190 0.38 -0.4 4,641,872 + +0.6 4,641,872 + Pf1N1B4_4190 0.39 +2.7 4,641,872 + Pf1N1B4_4190 0.39 +0.2 4,641,873 - Pf1N1B4_4190 0.39 +0.5 4,641,873 - Pf1N1B4_4190 0.39 -2.4 4,641,873 - Pf1N1B4_4190 0.39 -0.5 4,641,873 - Pf1N1B4_4190 0.39 +0.6 4,642,136 + +0.6 4,642,137 - Pf1N1B4_4190 0.61 +0.5 4,642,151 - +0.6 4,642,201 - Pf1N1B4_4190 0.66 +0.6 4,642,320 + Pf1N1B4_4190 0.76 +1.0 4,642,320 + Pf1N1B4_4190 0.76 +1.0 4,642,320 + Pf1N1B4_4190 0.76 +1.2 4,642,320 + Pf1N1B4_4190 0.76 +1.8 4,642,321 - Pf1N1B4_4190 0.76 +0.9 4,642,321 - Pf1N1B4_4190 0.76 +1.1 4,642,350 + Pf1N1B4_4190 0.79 -0.4 4,642,458 - Pf1N1B4_4190 0.88 +1.0 4,642,595 + -0.0 4,642,654 + -0.8 4,642,654 + +1.0 4,642,654 + +0.5 4,642,654 + +0.4 4,642,655 - -1.4 4,642,717 + +1.2 4,642,717 + -2.9 4,642,718 - +0.2 4,642,718 - +0.2 4,642,718 - -0.0 4,642,736 + -0.4 4,642,864 + -1.1 4,642,865 - -0.9 4,642,951 + +1.4 4,642,977 + +0.2 4,643,000 + -1.5 4,643,001 - -0.9 4,643,015 + +0.8 4,643,016 - -0.9 4,643,048 - +1.6 4,643,068 - -2.4 4,643,129 + -0.0 4,643,197 - -0.4 4,643,197 - -0.4 4,643,402 - +2.3 4,643,425 - +0.4 4,643,502 + -0.1 4,643,502 + +0.2 4,643,502 + +0.1 4,643,502 + -0.0 4,643,503 - +1.2 4,643,534 - -0.8
Or see this region's nucleotide sequence