Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4155 and Pf1N1B4_4156 are separated by 242 nucleotides Pf1N1B4_4156 and Pf1N1B4_4157 are separated by 357 nucleotides
Pf1N1B4_4155 - Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-), at 4,599,985 to 4,600,719
_4155
Pf1N1B4_4156 - putative secreted protein, at 4,600,962 to 4,601,711
_4156
Pf1N1B4_4157 - Probable signal peptide protein, at 4,602,069 to 4,602,860
_4157
Position (kb)
4600
4601
4602 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4600.085 kb on + strand, within Pf1N1B4_4155 at 4600.401 kb on + strand, within Pf1N1B4_4155 at 4600.401 kb on + strand, within Pf1N1B4_4155 at 4600.741 kb on - strand at 4600.811 kb on + strand at 4600.811 kb on + strand at 4601.059 kb on + strand, within Pf1N1B4_4156 at 4601.060 kb on - strand, within Pf1N1B4_4156 at 4601.239 kb on - strand, within Pf1N1B4_4156 at 4601.239 kb on - strand, within Pf1N1B4_4156 at 4601.239 kb on - strand, within Pf1N1B4_4156 at 4601.332 kb on - strand, within Pf1N1B4_4156 at 4601.750 kb on - strand at 4601.830 kb on + strand at 4601.920 kb on + strand at 4601.920 kb on + strand at 4601.920 kb on + strand at 4601.921 kb on - strand at 4601.922 kb on + strand at 4601.922 kb on + strand at 4601.938 kb on - strand at 4602.006 kb on + strand at 4602.012 kb on - strand at 4602.012 kb on - strand at 4602.015 kb on + strand at 4602.066 kb on + strand at 4602.302 kb on + strand, within Pf1N1B4_4157 at 4602.334 kb on + strand, within Pf1N1B4_4157 at 4602.334 kb on + strand, within Pf1N1B4_4157 at 4602.334 kb on + strand at 4602.334 kb on + strand, within Pf1N1B4_4157 at 4602.335 kb on - strand at 4602.335 kb on - strand, within Pf1N1B4_4157 at 4602.335 kb on - strand, within Pf1N1B4_4157 at 4602.336 kb on + strand, within Pf1N1B4_4157 at 4602.445 kb on - strand, within Pf1N1B4_4157 at 4602.661 kb on - strand, within Pf1N1B4_4157 at 4602.661 kb on - strand, within Pf1N1B4_4157 at 4602.669 kb on + strand, within Pf1N1B4_4157 at 4602.678 kb on + strand, within Pf1N1B4_4157 at 4602.679 kb on - strand, within Pf1N1B4_4157 at 4602.679 kb on - strand, within Pf1N1B4_4157 at 4602.679 kb on - strand, within Pf1N1B4_4157 at 4602.707 kb on + strand, within Pf1N1B4_4157 at 4602.707 kb on + strand, within Pf1N1B4_4157
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,600,085 + Pf1N1B4_4155 0.14 -0.3 4,600,401 + Pf1N1B4_4155 0.57 +0.4 4,600,401 + Pf1N1B4_4155 0.57 -0.7 4,600,741 - +0.2 4,600,811 + +1.0 4,600,811 + +0.7 4,601,059 + Pf1N1B4_4156 0.13 +1.2 4,601,060 - Pf1N1B4_4156 0.13 -1.9 4,601,239 - Pf1N1B4_4156 0.37 -1.3 4,601,239 - Pf1N1B4_4156 0.37 -1.3 4,601,239 - Pf1N1B4_4156 0.37 -0.1 4,601,332 - Pf1N1B4_4156 0.49 -1.7 4,601,750 - -1.1 4,601,830 + -1.3 4,601,920 + +0.5 4,601,920 + -0.0 4,601,920 + +0.9 4,601,921 - +0.2 4,601,922 + -0.3 4,601,922 + +1.7 4,601,938 - -0.3 4,602,006 + +0.1 4,602,012 - +0.4 4,602,012 - -0.1 4,602,015 + -0.4 4,602,066 + -1.6 4,602,302 + Pf1N1B4_4157 0.29 -0.1 4,602,334 + Pf1N1B4_4157 0.33 +1.2 4,602,334 + Pf1N1B4_4157 0.33 -0.3 4,602,334 + -1.9 4,602,334 + Pf1N1B4_4157 0.33 +1.0 4,602,335 - -0.3 4,602,335 - Pf1N1B4_4157 0.34 +0.1 4,602,335 - Pf1N1B4_4157 0.34 -0.5 4,602,336 + Pf1N1B4_4157 0.34 -0.3 4,602,445 - Pf1N1B4_4157 0.47 -1.1 4,602,661 - Pf1N1B4_4157 0.75 +0.4 4,602,661 - Pf1N1B4_4157 0.75 +0.7 4,602,669 + Pf1N1B4_4157 0.76 +2.0 4,602,678 + Pf1N1B4_4157 0.77 -0.6 4,602,679 - Pf1N1B4_4157 0.77 +0.2 4,602,679 - Pf1N1B4_4157 0.77 +0.7 4,602,679 - Pf1N1B4_4157 0.77 +0.5 4,602,707 + Pf1N1B4_4157 0.81 -0.7 4,602,707 + Pf1N1B4_4157 0.81 -0.0
Or see this region's nucleotide sequence