Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_3699 and Pf1N1B4_3700 are separated by 30 nucleotides Pf1N1B4_3700 and Pf1N1B4_3701 are separated by 230 nucleotides
Pf1N1B4_3699 - FIG00954480: hypothetical protein, at 4,107,759 to 4,108,817
_3699
Pf1N1B4_3700 - Putative permease often clustered with de novo purine synthesis, at 4,108,848 to 4,109,921
_3700
Pf1N1B4_3701 - Chromosomal replication initiator protein DnaA, at 4,110,152 to 4,110,856
_3701
Position (kb)
4108
4109
4110 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4108.397 kb on - strand, within Pf1N1B4_3699 at 4108.397 kb on - strand, within Pf1N1B4_3699 at 4108.826 kb on + strand at 4108.827 kb on - strand at 4108.827 kb on - strand at 4108.827 kb on - strand at 4108.828 kb on + strand at 4108.828 kb on + strand at 4108.828 kb on + strand at 4108.829 kb on - strand at 4108.830 kb on + strand at 4108.831 kb on - strand at 4108.831 kb on - strand at 4108.845 kb on + strand at 4108.845 kb on + strand at 4108.908 kb on + strand at 4108.959 kb on + strand, within Pf1N1B4_3700 at 4108.960 kb on - strand, within Pf1N1B4_3700 at 4108.960 kb on - strand, within Pf1N1B4_3700 at 4109.110 kb on - strand, within Pf1N1B4_3700 at 4109.110 kb on - strand, within Pf1N1B4_3700 at 4109.110 kb on - strand, within Pf1N1B4_3700 at 4109.505 kb on + strand, within Pf1N1B4_3700 at 4109.506 kb on - strand, within Pf1N1B4_3700 at 4109.506 kb on - strand at 4109.586 kb on + strand, within Pf1N1B4_3700 at 4109.587 kb on - strand, within Pf1N1B4_3700 at 4109.587 kb on - strand, within Pf1N1B4_3700 at 4109.656 kb on - strand, within Pf1N1B4_3700 at 4109.875 kb on - strand at 4109.875 kb on - strand at 4109.875 kb on - strand at 4109.875 kb on - strand at 4109.875 kb on - strand at 4109.875 kb on - strand at 4109.875 kb on - strand at 4109.875 kb on - strand at 4109.893 kb on - strand at 4109.893 kb on - strand at 4109.893 kb on - strand at 4109.893 kb on - strand at 4109.919 kb on + strand at 4110.896 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,108,397 - Pf1N1B4_3699 0.60 -2.2 4,108,397 - Pf1N1B4_3699 0.60 -0.2 4,108,826 + +0.8 4,108,827 - +0.4 4,108,827 - +0.2 4,108,827 - -1.5 4,108,828 + -1.2 4,108,828 + +0.3 4,108,828 + +0.2 4,108,829 - -0.6 4,108,830 + +0.2 4,108,831 - +1.1 4,108,831 - -0.2 4,108,845 + -1.0 4,108,845 + +2.1 4,108,908 + +1.0 4,108,959 + Pf1N1B4_3700 0.10 +0.8 4,108,960 - Pf1N1B4_3700 0.10 +0.1 4,108,960 - Pf1N1B4_3700 0.10 -1.2 4,109,110 - Pf1N1B4_3700 0.24 -2.2 4,109,110 - Pf1N1B4_3700 0.24 -0.9 4,109,110 - Pf1N1B4_3700 0.24 +0.1 4,109,505 + Pf1N1B4_3700 0.61 -1.8 4,109,506 - Pf1N1B4_3700 0.61 -0.2 4,109,506 - -1.2 4,109,586 + Pf1N1B4_3700 0.69 -1.2 4,109,587 - Pf1N1B4_3700 0.69 +0.1 4,109,587 - Pf1N1B4_3700 0.69 +0.1 4,109,656 - Pf1N1B4_3700 0.75 +0.4 4,109,875 - +0.8 4,109,875 - -3.2 4,109,875 - +1.0 4,109,875 - -1.0 4,109,875 - -0.3 4,109,875 - -0.0 4,109,875 - +1.1 4,109,875 - +0.9 4,109,893 - +1.8 4,109,893 - -2.0 4,109,893 - -1.8 4,109,893 - +0.8 4,109,919 + -1.8 4,110,896 - -1.4
Or see this region's nucleotide sequence