Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_3654 and Pf1N1B4_3655 are separated by 106 nucleotides Pf1N1B4_3655 and Pf1N1B4_3656 are separated by 21 nucleotides Pf1N1B4_3656 and Pf1N1B4_3657 are separated by 139 nucleotides
Pf1N1B4_3654 - Sulfate and thiosulfate binding protein CysP, at 4,058,731 to 4,059,729
_3654
Pf1N1B4_3655 - Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family, at 4,059,836 to 4,060,660
_3655
Pf1N1B4_3656 - Eukaryotic-type low-affinity urea transporter, at 4,060,682 to 4,061,596
_3656
Pf1N1B4_3657 - Pyruvate kinase (EC 2.7.1.40), at 4,061,736 to 4,063,151
_3657
Position (kb)
4060
4061
4062 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4059.761 kb on - strand at 4059.761 kb on - strand at 4059.790 kb on + strand at 4059.791 kb on - strand at 4060.101 kb on + strand, within Pf1N1B4_3655 at 4060.101 kb on + strand, within Pf1N1B4_3655 at 4060.101 kb on + strand at 4060.102 kb on - strand, within Pf1N1B4_3655 at 4060.102 kb on - strand, within Pf1N1B4_3655 at 4060.152 kb on + strand, within Pf1N1B4_3655 at 4060.152 kb on + strand, within Pf1N1B4_3655 at 4060.152 kb on + strand, within Pf1N1B4_3655 at 4060.153 kb on - strand, within Pf1N1B4_3655 at 4060.153 kb on - strand, within Pf1N1B4_3655 at 4060.153 kb on - strand, within Pf1N1B4_3655 at 4060.153 kb on - strand, within Pf1N1B4_3655 at 4060.153 kb on - strand, within Pf1N1B4_3655 at 4060.153 kb on - strand, within Pf1N1B4_3655 at 4060.245 kb on + strand at 4060.245 kb on + strand, within Pf1N1B4_3655 at 4060.245 kb on + strand, within Pf1N1B4_3655 at 4060.245 kb on + strand at 4060.246 kb on - strand, within Pf1N1B4_3655 at 4060.344 kb on + strand, within Pf1N1B4_3655 at 4060.345 kb on - strand, within Pf1N1B4_3655 at 4060.345 kb on - strand, within Pf1N1B4_3655 at 4060.432 kb on - strand, within Pf1N1B4_3655 at 4060.432 kb on - strand, within Pf1N1B4_3655 at 4060.486 kb on - strand, within Pf1N1B4_3655 at 4060.486 kb on - strand, within Pf1N1B4_3655 at 4060.493 kb on + strand, within Pf1N1B4_3655 at 4060.493 kb on + strand, within Pf1N1B4_3655 at 4060.503 kb on + strand, within Pf1N1B4_3655 at 4060.503 kb on + strand, within Pf1N1B4_3655 at 4060.503 kb on + strand, within Pf1N1B4_3655 at 4060.504 kb on - strand, within Pf1N1B4_3655 at 4060.504 kb on - strand, within Pf1N1B4_3655 at 4060.626 kb on + strand at 4060.626 kb on + strand at 4060.626 kb on + strand at 4060.626 kb on + strand at 4060.627 kb on - strand at 4060.627 kb on - strand at 4060.627 kb on - strand at 4060.627 kb on - strand at 4060.693 kb on + strand at 4060.694 kb on - strand at 4060.694 kb on - strand at 4060.940 kb on + strand, within Pf1N1B4_3656 at 4061.326 kb on - strand at 4061.354 kb on - strand, within Pf1N1B4_3656 at 4061.361 kb on + strand, within Pf1N1B4_3656 at 4061.398 kb on - strand, within Pf1N1B4_3656 at 4061.737 kb on + strand at 4061.802 kb on - strand at 4061.813 kb on + strand at 4062.005 kb on + strand, within Pf1N1B4_3657 at 4062.006 kb on - strand at 4062.006 kb on - strand, within Pf1N1B4_3657 at 4062.026 kb on - strand, within Pf1N1B4_3657 at 4062.026 kb on - strand, within Pf1N1B4_3657
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,059,761 - +0.5 4,059,761 - -1.4 4,059,790 + -0.7 4,059,791 - +1.0 4,060,101 + Pf1N1B4_3655 0.32 +0.4 4,060,101 + Pf1N1B4_3655 0.32 +0.8 4,060,101 + +1.4 4,060,102 - Pf1N1B4_3655 0.32 -0.3 4,060,102 - Pf1N1B4_3655 0.32 +1.1 4,060,152 + Pf1N1B4_3655 0.38 +0.6 4,060,152 + Pf1N1B4_3655 0.38 -0.2 4,060,152 + Pf1N1B4_3655 0.38 +1.3 4,060,153 - Pf1N1B4_3655 0.38 -1.2 4,060,153 - Pf1N1B4_3655 0.38 +0.0 4,060,153 - Pf1N1B4_3655 0.38 -0.2 4,060,153 - Pf1N1B4_3655 0.38 -0.4 4,060,153 - Pf1N1B4_3655 0.38 +0.3 4,060,153 - Pf1N1B4_3655 0.38 +2.4 4,060,245 + +0.4 4,060,245 + Pf1N1B4_3655 0.50 -0.5 4,060,245 + Pf1N1B4_3655 0.50 -0.8 4,060,245 + -1.2 4,060,246 - Pf1N1B4_3655 0.50 +1.3 4,060,344 + Pf1N1B4_3655 0.62 +0.4 4,060,345 - Pf1N1B4_3655 0.62 +1.0 4,060,345 - Pf1N1B4_3655 0.62 -0.3 4,060,432 - Pf1N1B4_3655 0.72 -0.2 4,060,432 - Pf1N1B4_3655 0.72 -0.4 4,060,486 - Pf1N1B4_3655 0.79 -0.2 4,060,486 - Pf1N1B4_3655 0.79 +0.6 4,060,493 + Pf1N1B4_3655 0.80 -2.2 4,060,493 + Pf1N1B4_3655 0.80 -0.8 4,060,503 + Pf1N1B4_3655 0.81 +1.4 4,060,503 + Pf1N1B4_3655 0.81 +0.2 4,060,503 + Pf1N1B4_3655 0.81 -0.6 4,060,504 - Pf1N1B4_3655 0.81 +0.2 4,060,504 - Pf1N1B4_3655 0.81 -0.2 4,060,626 + +1.8 4,060,626 + +0.8 4,060,626 + +0.8 4,060,626 + -1.2 4,060,627 - -0.2 4,060,627 - +1.1 4,060,627 - -3.0 4,060,627 - +0.8 4,060,693 + +1.4 4,060,694 - +1.0 4,060,694 - +1.0 4,060,940 + Pf1N1B4_3656 0.28 -0.2 4,061,326 - +1.4 4,061,354 - Pf1N1B4_3656 0.73 -1.2 4,061,361 + Pf1N1B4_3656 0.74 -0.8 4,061,398 - Pf1N1B4_3656 0.78 -2.2 4,061,737 + -0.0 4,061,802 - -0.2 4,061,813 + +0.8 4,062,005 + Pf1N1B4_3657 0.19 +0.1 4,062,006 - -0.2 4,062,006 - Pf1N1B4_3657 0.19 -0.6 4,062,026 - Pf1N1B4_3657 0.20 +0.2 4,062,026 - Pf1N1B4_3657 0.20 +1.2
Or see this region's nucleotide sequence