Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_2957 and Pf1N1B4_2958 overlap by 10 nucleotides Pf1N1B4_2958 and Pf1N1B4_2959 are separated by 334 nucleotides
Pf1N1B4_2957 - Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-), at 3,310,529 to 3,311,830
_2957
Pf1N1B4_2958 - Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-), at 3,311,821 to 3,312,210
_2958
Pf1N1B4_2959 - FIG067310: hypothetical protein, at 3,312,545 to 3,314,434
_2959
Position (kb)
3311
3312
3313 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3310.853 kb on + strand, within Pf1N1B4_2957 at 3310.853 kb on + strand, within Pf1N1B4_2957 at 3310.853 kb on + strand, within Pf1N1B4_2957 at 3310.913 kb on + strand, within Pf1N1B4_2957 at 3310.913 kb on + strand, within Pf1N1B4_2957 at 3310.913 kb on + strand, within Pf1N1B4_2957 at 3310.913 kb on + strand, within Pf1N1B4_2957 at 3310.914 kb on - strand, within Pf1N1B4_2957 at 3310.914 kb on - strand at 3311.012 kb on + strand, within Pf1N1B4_2957 at 3311.013 kb on - strand, within Pf1N1B4_2957 at 3311.013 kb on - strand, within Pf1N1B4_2957 at 3311.045 kb on + strand, within Pf1N1B4_2957 at 3311.046 kb on - strand, within Pf1N1B4_2957 at 3311.090 kb on + strand, within Pf1N1B4_2957 at 3311.090 kb on + strand, within Pf1N1B4_2957 at 3311.090 kb on + strand, within Pf1N1B4_2957 at 3311.091 kb on - strand, within Pf1N1B4_2957 at 3311.126 kb on + strand, within Pf1N1B4_2957 at 3311.126 kb on + strand, within Pf1N1B4_2957 at 3311.126 kb on + strand, within Pf1N1B4_2957 at 3311.127 kb on - strand, within Pf1N1B4_2957 at 3311.127 kb on - strand, within Pf1N1B4_2957 at 3311.222 kb on + strand, within Pf1N1B4_2957 at 3311.222 kb on + strand, within Pf1N1B4_2957 at 3311.222 kb on + strand, within Pf1N1B4_2957 at 3311.222 kb on + strand, within Pf1N1B4_2957 at 3311.222 kb on + strand, within Pf1N1B4_2957 at 3311.222 kb on + strand, within Pf1N1B4_2957 at 3311.222 kb on + strand, within Pf1N1B4_2957 at 3311.222 kb on + strand, within Pf1N1B4_2957 at 3311.222 kb on + strand, within Pf1N1B4_2957 at 3311.222 kb on + strand, within Pf1N1B4_2957 at 3311.222 kb on + strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.223 kb on - strand, within Pf1N1B4_2957 at 3311.270 kb on + strand, within Pf1N1B4_2957 at 3311.270 kb on + strand at 3311.271 kb on - strand, within Pf1N1B4_2957 at 3311.274 kb on + strand, within Pf1N1B4_2957 at 3311.274 kb on + strand at 3311.275 kb on - strand, within Pf1N1B4_2957 at 3311.275 kb on - strand, within Pf1N1B4_2957 at 3311.275 kb on - strand, within Pf1N1B4_2957 at 3311.316 kb on - strand, within Pf1N1B4_2957 at 3311.327 kb on + strand, within Pf1N1B4_2957 at 3311.480 kb on + strand, within Pf1N1B4_2957 at 3311.480 kb on + strand, within Pf1N1B4_2957 at 3311.480 kb on + strand, within Pf1N1B4_2957 at 3311.480 kb on + strand, within Pf1N1B4_2957 at 3311.480 kb on + strand, within Pf1N1B4_2957 at 3311.480 kb on + strand, within Pf1N1B4_2957 at 3311.481 kb on - strand, within Pf1N1B4_2957 at 3311.481 kb on - strand, within Pf1N1B4_2957 at 3311.481 kb on - strand, within Pf1N1B4_2957 at 3311.481 kb on - strand, within Pf1N1B4_2957 at 3311.481 kb on - strand, within Pf1N1B4_2957 at 3311.481 kb on - strand, within Pf1N1B4_2957 at 3311.481 kb on - strand, within Pf1N1B4_2957 at 3311.609 kb on + strand, within Pf1N1B4_2957 at 3311.741 kb on + strand at 3311.742 kb on - strand at 3311.742 kb on - strand at 3311.742 kb on - strand at 3311.936 kb on + strand, within Pf1N1B4_2958 at 3311.936 kb on + strand, within Pf1N1B4_2958 at 3311.936 kb on + strand, within Pf1N1B4_2958 at 3311.937 kb on - strand at 3311.937 kb on - strand, within Pf1N1B4_2958 at 3312.105 kb on + strand, within Pf1N1B4_2958 at 3312.189 kb on + strand at 3312.189 kb on + strand at 3312.189 kb on + strand at 3312.189 kb on + strand at 3312.189 kb on + strand at 3312.189 kb on + strand at 3312.189 kb on + strand at 3312.189 kb on + strand at 3312.190 kb on - strand at 3312.190 kb on - strand at 3312.190 kb on - strand at 3312.190 kb on - strand at 3312.209 kb on - strand at 3312.383 kb on + strand at 3312.384 kb on - strand at 3312.501 kb on + strand at 3312.507 kb on + strand at 3312.507 kb on + strand at 3312.523 kb on + strand at 3312.523 kb on + strand at 3312.524 kb on - strand at 3312.524 kb on - strand at 3312.524 kb on - strand at 3312.700 kb on + strand at 3313.002 kb on - strand, within Pf1N1B4_2959 at 3313.066 kb on + strand, within Pf1N1B4_2959 at 3313.067 kb on - strand, within Pf1N1B4_2959 at 3313.172 kb on + strand, within Pf1N1B4_2959 at 3313.172 kb on + strand, within Pf1N1B4_2959 at 3313.172 kb on + strand, within Pf1N1B4_2959 at 3313.172 kb on + strand, within Pf1N1B4_2959 at 3313.172 kb on + strand, within Pf1N1B4_2959 at 3313.173 kb on - strand, within Pf1N1B4_2959
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,310,853 + Pf1N1B4_2957 0.25 -2.5 3,310,853 + Pf1N1B4_2957 0.25 +0.9 3,310,853 + Pf1N1B4_2957 0.25 -0.2 3,310,913 + Pf1N1B4_2957 0.29 +0.1 3,310,913 + Pf1N1B4_2957 0.29 +0.8 3,310,913 + Pf1N1B4_2957 0.29 -0.5 3,310,913 + Pf1N1B4_2957 0.29 +0.3 3,310,914 - Pf1N1B4_2957 0.30 -0.7 3,310,914 - +1.4 3,311,012 + Pf1N1B4_2957 0.37 -0.2 3,311,013 - Pf1N1B4_2957 0.37 +0.7 3,311,013 - Pf1N1B4_2957 0.37 -0.3 3,311,045 + Pf1N1B4_2957 0.40 +0.1 3,311,046 - Pf1N1B4_2957 0.40 +0.6 3,311,090 + Pf1N1B4_2957 0.43 -0.3 3,311,090 + Pf1N1B4_2957 0.43 +0.7 3,311,090 + Pf1N1B4_2957 0.43 -0.9 3,311,091 - Pf1N1B4_2957 0.43 -0.5 3,311,126 + Pf1N1B4_2957 0.46 +1.5 3,311,126 + Pf1N1B4_2957 0.46 +2.4 3,311,126 + Pf1N1B4_2957 0.46 +0.7 3,311,127 - Pf1N1B4_2957 0.46 +0.4 3,311,127 - Pf1N1B4_2957 0.46 +0.1 3,311,222 + Pf1N1B4_2957 0.53 -0.8 3,311,222 + Pf1N1B4_2957 0.53 -0.1 3,311,222 + Pf1N1B4_2957 0.53 +0.1 3,311,222 + Pf1N1B4_2957 0.53 -0.6 3,311,222 + Pf1N1B4_2957 0.53 +0.3 3,311,222 + Pf1N1B4_2957 0.53 -0.2 3,311,222 + Pf1N1B4_2957 0.53 +0.1 3,311,222 + Pf1N1B4_2957 0.53 -0.3 3,311,222 + Pf1N1B4_2957 0.53 +0.1 3,311,222 + Pf1N1B4_2957 0.53 +0.7 3,311,222 + Pf1N1B4_2957 0.53 +0.1 3,311,223 - Pf1N1B4_2957 0.53 +0.1 3,311,223 - Pf1N1B4_2957 0.53 +1.9 3,311,223 - Pf1N1B4_2957 0.53 -0.3 3,311,223 - Pf1N1B4_2957 0.53 -0.1 3,311,223 - Pf1N1B4_2957 0.53 +1.7 3,311,223 - Pf1N1B4_2957 0.53 -1.2 3,311,223 - Pf1N1B4_2957 0.53 +0.7 3,311,223 - Pf1N1B4_2957 0.53 +0.7 3,311,223 - Pf1N1B4_2957 0.53 +0.6 3,311,223 - Pf1N1B4_2957 0.53 +0.4 3,311,223 - Pf1N1B4_2957 0.53 -1.5 3,311,223 - Pf1N1B4_2957 0.53 +0.8 3,311,270 + Pf1N1B4_2957 0.57 -0.5 3,311,270 + -1.5 3,311,271 - Pf1N1B4_2957 0.57 -0.6 3,311,274 + Pf1N1B4_2957 0.57 -0.1 3,311,274 + +0.1 3,311,275 - Pf1N1B4_2957 0.57 +1.1 3,311,275 - Pf1N1B4_2957 0.57 -0.9 3,311,275 - Pf1N1B4_2957 0.57 -0.8 3,311,316 - Pf1N1B4_2957 0.60 +0.2 3,311,327 + Pf1N1B4_2957 0.61 -0.2 3,311,480 + Pf1N1B4_2957 0.73 +1.5 3,311,480 + Pf1N1B4_2957 0.73 -0.9 3,311,480 + Pf1N1B4_2957 0.73 -0.6 3,311,480 + Pf1N1B4_2957 0.73 -0.4 3,311,480 + Pf1N1B4_2957 0.73 +0.9 3,311,480 + Pf1N1B4_2957 0.73 +0.7 3,311,481 - Pf1N1B4_2957 0.73 -1.5 3,311,481 - Pf1N1B4_2957 0.73 +0.8 3,311,481 - Pf1N1B4_2957 0.73 +1.1 3,311,481 - Pf1N1B4_2957 0.73 -0.6 3,311,481 - Pf1N1B4_2957 0.73 -1.2 3,311,481 - Pf1N1B4_2957 0.73 +1.9 3,311,481 - Pf1N1B4_2957 0.73 +1.7 3,311,609 + Pf1N1B4_2957 0.83 +1.7 3,311,741 + -0.9 3,311,742 - -1.9 3,311,742 - +0.5 3,311,742 - -0.7 3,311,936 + Pf1N1B4_2958 0.29 -1.5 3,311,936 + Pf1N1B4_2958 0.29 -0.6 3,311,936 + Pf1N1B4_2958 0.29 -1.7 3,311,937 - -1.9 3,311,937 - Pf1N1B4_2958 0.30 +0.1 3,312,105 + Pf1N1B4_2958 0.73 -2.1 3,312,189 + +0.1 3,312,189 + -1.5 3,312,189 + -1.5 3,312,189 + +2.1 3,312,189 + -0.2 3,312,189 + +0.8 3,312,189 + +0.0 3,312,189 + +0.1 3,312,190 - +0.1 3,312,190 - -0.5 3,312,190 - -0.9 3,312,190 - -1.5 3,312,209 - -0.9 3,312,383 + -0.8 3,312,384 - -1.9 3,312,501 + -2.5 3,312,507 + +0.1 3,312,507 + +1.1 3,312,523 + -0.6 3,312,523 + +0.8 3,312,524 - -0.9 3,312,524 - +1.4 3,312,524 - +0.3 3,312,700 + +1.1 3,313,002 - Pf1N1B4_2959 0.24 -0.3 3,313,066 + Pf1N1B4_2959 0.28 +0.1 3,313,067 - Pf1N1B4_2959 0.28 +0.7 3,313,172 + Pf1N1B4_2959 0.33 +2.1 3,313,172 + Pf1N1B4_2959 0.33 -0.9 3,313,172 + Pf1N1B4_2959 0.33 -2.7 3,313,172 + Pf1N1B4_2959 0.33 -2.5 3,313,172 + Pf1N1B4_2959 0.33 -0.5 3,313,173 - Pf1N1B4_2959 0.33 +1.9
Or see this region's nucleotide sequence