Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_2441 and Pf1N1B4_2442 are separated by 15 nucleotides Pf1N1B4_2442 and Pf1N1B4_2443 are separated by 188 nucleotides
Pf1N1B4_2441 - Electron transfer flavoprotein, alpha subunit, at 2,766,106 to 2,767,326
_2441
Pf1N1B4_2442 - Electron transfer flavoprotein, beta subunit, at 2,767,342 to 2,768,112
_2442
Pf1N1B4_2443 - acetyltransferase, GNAT family, at 2,768,301 to 2,768,867
_2443
Position (kb)
2767
2768
2769 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2766.373 kb on + strand, within Pf1N1B4_2441 at 2766.373 kb on + strand, within Pf1N1B4_2441 at 2766.373 kb on + strand, within Pf1N1B4_2441 at 2766.374 kb on - strand, within Pf1N1B4_2441 at 2766.374 kb on - strand, within Pf1N1B4_2441 at 2766.374 kb on - strand, within Pf1N1B4_2441 at 2766.483 kb on - strand, within Pf1N1B4_2441 at 2766.483 kb on - strand at 2766.568 kb on + strand, within Pf1N1B4_2441 at 2767.120 kb on + strand, within Pf1N1B4_2441 at 2767.121 kb on - strand, within Pf1N1B4_2441 at 2767.286 kb on + strand at 2767.286 kb on + strand at 2767.342 kb on - strand at 2767.510 kb on + strand, within Pf1N1B4_2442 at 2767.511 kb on - strand, within Pf1N1B4_2442 at 2767.588 kb on + strand, within Pf1N1B4_2442 at 2767.588 kb on + strand, within Pf1N1B4_2442 at 2767.589 kb on - strand, within Pf1N1B4_2442 at 2767.589 kb on - strand, within Pf1N1B4_2442 at 2767.589 kb on - strand, within Pf1N1B4_2442 at 2767.790 kb on + strand at 2767.790 kb on + strand, within Pf1N1B4_2442 at 2767.790 kb on + strand, within Pf1N1B4_2442 at 2767.791 kb on - strand, within Pf1N1B4_2442 at 2767.872 kb on - strand, within Pf1N1B4_2442 at 2768.290 kb on - strand at 2768.299 kb on + strand at 2768.300 kb on - strand at 2768.388 kb on + strand, within Pf1N1B4_2443 at 2768.389 kb on - strand, within Pf1N1B4_2443 at 2768.389 kb on - strand, within Pf1N1B4_2443 at 2768.532 kb on + strand at 2768.532 kb on + strand, within Pf1N1B4_2443 at 2768.532 kb on + strand, within Pf1N1B4_2443 at 2768.532 kb on + strand, within Pf1N1B4_2443 at 2768.532 kb on + strand, within Pf1N1B4_2443 at 2768.532 kb on + strand, within Pf1N1B4_2443 at 2768.533 kb on - strand, within Pf1N1B4_2443 at 2768.533 kb on - strand, within Pf1N1B4_2443 at 2768.533 kb on - strand, within Pf1N1B4_2443 at 2768.533 kb on - strand, within Pf1N1B4_2443 at 2768.590 kb on - strand, within Pf1N1B4_2443 at 2768.619 kb on + strand, within Pf1N1B4_2443 at 2768.619 kb on + strand, within Pf1N1B4_2443 at 2768.620 kb on - strand, within Pf1N1B4_2443 at 2768.621 kb on + strand, within Pf1N1B4_2443 at 2768.621 kb on + strand at 2768.621 kb on + strand, within Pf1N1B4_2443 at 2768.621 kb on + strand, within Pf1N1B4_2443 at 2768.622 kb on - strand, within Pf1N1B4_2443 at 2768.622 kb on - strand, within Pf1N1B4_2443 at 2768.622 kb on - strand, within Pf1N1B4_2443 at 2768.686 kb on - strand, within Pf1N1B4_2443 at 2768.692 kb on - strand, within Pf1N1B4_2443 at 2768.769 kb on + strand, within Pf1N1B4_2443 at 2768.769 kb on + strand, within Pf1N1B4_2443 at 2768.847 kb on + strand at 2768.847 kb on + strand at 2768.847 kb on + strand at 2768.847 kb on + strand at 2768.847 kb on + strand at 2768.848 kb on - strand at 2768.848 kb on - strand at 2768.848 kb on - strand at 2768.848 kb on - strand at 2768.848 kb on - strand at 2768.856 kb on + strand at 2768.857 kb on - strand at 2768.866 kb on - strand at 2768.981 kb on + strand at 2768.981 kb on + strand at 2768.982 kb on - strand at 2768.982 kb on - strand at 2768.982 kb on - strand at 2768.982 kb on - strand at 2768.982 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,766,373 + Pf1N1B4_2441 0.22 -0.7 2,766,373 + Pf1N1B4_2441 0.22 +0.3 2,766,373 + Pf1N1B4_2441 0.22 +0.6 2,766,374 - Pf1N1B4_2441 0.22 +0.5 2,766,374 - Pf1N1B4_2441 0.22 -0.7 2,766,374 - Pf1N1B4_2441 0.22 +0.5 2,766,483 - Pf1N1B4_2441 0.31 +1.9 2,766,483 - +0.9 2,766,568 + Pf1N1B4_2441 0.38 +0.0 2,767,120 + Pf1N1B4_2441 0.83 +0.5 2,767,121 - Pf1N1B4_2441 0.83 +0.7 2,767,286 + +0.7 2,767,286 + -0.6 2,767,342 - +0.3 2,767,510 + Pf1N1B4_2442 0.22 -1.0 2,767,511 - Pf1N1B4_2442 0.22 -1.0 2,767,588 + Pf1N1B4_2442 0.32 -1.0 2,767,588 + Pf1N1B4_2442 0.32 +0.9 2,767,589 - Pf1N1B4_2442 0.32 +1.0 2,767,589 - Pf1N1B4_2442 0.32 +0.6 2,767,589 - Pf1N1B4_2442 0.32 +1.3 2,767,790 + +1.9 2,767,790 + Pf1N1B4_2442 0.58 -1.7 2,767,790 + Pf1N1B4_2442 0.58 -1.5 2,767,791 - Pf1N1B4_2442 0.58 +0.3 2,767,872 - Pf1N1B4_2442 0.69 -1.9 2,768,290 - +3.3 2,768,299 + -0.1 2,768,300 - +1.2 2,768,388 + Pf1N1B4_2443 0.15 +0.6 2,768,389 - Pf1N1B4_2443 0.16 -0.1 2,768,389 - Pf1N1B4_2443 0.16 -0.9 2,768,532 + +1.3 2,768,532 + Pf1N1B4_2443 0.41 -0.2 2,768,532 + Pf1N1B4_2443 0.41 +0.7 2,768,532 + Pf1N1B4_2443 0.41 +3.0 2,768,532 + Pf1N1B4_2443 0.41 +0.6 2,768,532 + Pf1N1B4_2443 0.41 -1.4 2,768,533 - Pf1N1B4_2443 0.41 +0.7 2,768,533 - Pf1N1B4_2443 0.41 +2.3 2,768,533 - Pf1N1B4_2443 0.41 -1.7 2,768,533 - Pf1N1B4_2443 0.41 +0.5 2,768,590 - Pf1N1B4_2443 0.51 -0.7 2,768,619 + Pf1N1B4_2443 0.56 +0.3 2,768,619 + Pf1N1B4_2443 0.56 +0.3 2,768,620 - Pf1N1B4_2443 0.56 -1.3 2,768,621 + Pf1N1B4_2443 0.56 -0.3 2,768,621 + +0.3 2,768,621 + Pf1N1B4_2443 0.56 +0.3 2,768,621 + Pf1N1B4_2443 0.56 -0.9 2,768,622 - Pf1N1B4_2443 0.57 +0.3 2,768,622 - Pf1N1B4_2443 0.57 +1.6 2,768,622 - Pf1N1B4_2443 0.57 -0.7 2,768,686 - Pf1N1B4_2443 0.68 +0.9 2,768,692 - Pf1N1B4_2443 0.69 -0.1 2,768,769 + Pf1N1B4_2443 0.83 +1.5 2,768,769 + Pf1N1B4_2443 0.83 -0.7 2,768,847 + -0.3 2,768,847 + +1.7 2,768,847 + -1.3 2,768,847 + -1.0 2,768,847 + -0.3 2,768,848 - +0.5 2,768,848 - -0.1 2,768,848 - +2.3 2,768,848 - -0.0 2,768,848 - -1.3 2,768,856 + -0.7 2,768,857 - +0.9 2,768,866 - +0.5 2,768,981 + -0.5 2,768,981 + -0.5 2,768,982 - -0.6 2,768,982 - -1.3 2,768,982 - -0.7 2,768,982 - -0.0 2,768,982 - -0.8
Or see this region's nucleotide sequence