Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_1696 and Pf1N1B4_1697 are separated by 401 nucleotides Pf1N1B4_1697 and Pf1N1B4_1698 are separated by 38 nucleotides
Pf1N1B4_1696 - FIG00957011: hypothetical protein, at 1,942,661 to 1,943,425
_1696
Pf1N1B4_1697 - Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme, at 1,943,827 to 1,945,068
_1697
Pf1N1B4_1698 - Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme, at 1,945,107 to 1,946,300
_1698
Position (kb)
1943
1944
1945
1946 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1942.922 kb on + strand, within Pf1N1B4_1696 at 1942.922 kb on + strand, within Pf1N1B4_1696 at 1942.922 kb on + strand, within Pf1N1B4_1696 at 1942.923 kb on - strand, within Pf1N1B4_1696 at 1942.930 kb on + strand, within Pf1N1B4_1696 at 1943.129 kb on + strand, within Pf1N1B4_1696 at 1943.291 kb on + strand, within Pf1N1B4_1696 at 1943.291 kb on + strand, within Pf1N1B4_1696 at 1943.291 kb on + strand, within Pf1N1B4_1696 at 1943.291 kb on + strand, within Pf1N1B4_1696 at 1943.291 kb on + strand, within Pf1N1B4_1696 at 1943.292 kb on - strand, within Pf1N1B4_1696 at 1943.292 kb on - strand, within Pf1N1B4_1696 at 1943.292 kb on - strand, within Pf1N1B4_1696 at 1943.292 kb on - strand, within Pf1N1B4_1696 at 1943.292 kb on - strand, within Pf1N1B4_1696 at 1943.314 kb on + strand, within Pf1N1B4_1696 at 1943.370 kb on - strand at 1943.434 kb on + strand at 1943.631 kb on - strand at 1943.754 kb on + strand at 1943.754 kb on + strand at 1943.754 kb on + strand at 1943.754 kb on + strand at 1943.754 kb on + strand at 1943.755 kb on - strand at 1943.755 kb on - strand at 1943.755 kb on - strand at 1943.755 kb on - strand at 1943.755 kb on - strand at 1943.755 kb on - strand at 1943.758 kb on + strand at 1943.758 kb on + strand at 1943.758 kb on + strand at 1943.758 kb on + strand at 1943.758 kb on + strand at 1943.758 kb on + strand at 1943.759 kb on - strand at 1943.759 kb on - strand at 1944.037 kb on - strand, within Pf1N1B4_1697 at 1944.337 kb on + strand, within Pf1N1B4_1697 at 1944.337 kb on + strand, within Pf1N1B4_1697 at 1944.337 kb on + strand, within Pf1N1B4_1697 at 1944.338 kb on - strand, within Pf1N1B4_1697 at 1944.417 kb on - strand, within Pf1N1B4_1697 at 1944.417 kb on - strand, within Pf1N1B4_1697 at 1944.417 kb on - strand, within Pf1N1B4_1697 at 1944.565 kb on - strand, within Pf1N1B4_1697 at 1944.709 kb on + strand, within Pf1N1B4_1697 at 1944.709 kb on + strand, within Pf1N1B4_1697 at 1944.709 kb on + strand, within Pf1N1B4_1697 at 1944.710 kb on - strand, within Pf1N1B4_1697 at 1944.710 kb on - strand, within Pf1N1B4_1697 at 1944.710 kb on - strand, within Pf1N1B4_1697 at 1944.710 kb on - strand, within Pf1N1B4_1697 at 1944.710 kb on - strand, within Pf1N1B4_1697 at 1944.710 kb on - strand, within Pf1N1B4_1697 at 1944.710 kb on - strand, within Pf1N1B4_1697 at 1944.710 kb on - strand, within Pf1N1B4_1697 at 1944.785 kb on + strand, within Pf1N1B4_1697 at 1945.006 kb on + strand at 1945.006 kb on + strand at 1945.006 kb on + strand at 1945.007 kb on - strand at 1945.025 kb on - strand at 1945.246 kb on + strand, within Pf1N1B4_1698 at 1945.247 kb on - strand, within Pf1N1B4_1698 at 1945.290 kb on + strand, within Pf1N1B4_1698 at 1945.291 kb on - strand, within Pf1N1B4_1698 at 1945.291 kb on - strand, within Pf1N1B4_1698 at 1945.389 kb on + strand, within Pf1N1B4_1698 at 1945.389 kb on + strand, within Pf1N1B4_1698 at 1945.389 kb on + strand, within Pf1N1B4_1698 at 1945.390 kb on - strand, within Pf1N1B4_1698 at 1945.390 kb on - strand, within Pf1N1B4_1698 at 1945.390 kb on - strand, within Pf1N1B4_1698 at 1945.444 kb on - strand, within Pf1N1B4_1698 at 1945.572 kb on + strand, within Pf1N1B4_1698 at 1945.591 kb on - strand at 1945.591 kb on - strand, within Pf1N1B4_1698 at 1945.746 kb on + strand, within Pf1N1B4_1698 at 1945.746 kb on + strand, within Pf1N1B4_1698 at 1945.746 kb on + strand, within Pf1N1B4_1698 at 1945.746 kb on + strand, within Pf1N1B4_1698 at 1945.747 kb on - strand, within Pf1N1B4_1698 at 1945.747 kb on - strand, within Pf1N1B4_1698 at 1945.747 kb on - strand, within Pf1N1B4_1698 at 1945.747 kb on - strand, within Pf1N1B4_1698 at 1945.863 kb on + strand, within Pf1N1B4_1698 at 1945.863 kb on + strand, within Pf1N1B4_1698 at 1945.864 kb on - strand, within Pf1N1B4_1698 at 1945.864 kb on - strand, within Pf1N1B4_1698
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,942,922 + Pf1N1B4_1696 0.34 -0.5 1,942,922 + Pf1N1B4_1696 0.34 +1.0 1,942,922 + Pf1N1B4_1696 0.34 +0.5 1,942,923 - Pf1N1B4_1696 0.34 -0.1 1,942,930 + Pf1N1B4_1696 0.35 +0.3 1,943,129 + Pf1N1B4_1696 0.61 -0.9 1,943,291 + Pf1N1B4_1696 0.82 +0.3 1,943,291 + Pf1N1B4_1696 0.82 +1.5 1,943,291 + Pf1N1B4_1696 0.82 +0.8 1,943,291 + Pf1N1B4_1696 0.82 +0.0 1,943,291 + Pf1N1B4_1696 0.82 +0.5 1,943,292 - Pf1N1B4_1696 0.82 +0.6 1,943,292 - Pf1N1B4_1696 0.82 +0.1 1,943,292 - Pf1N1B4_1696 0.82 +0.5 1,943,292 - Pf1N1B4_1696 0.82 -1.7 1,943,292 - Pf1N1B4_1696 0.82 +0.6 1,943,314 + Pf1N1B4_1696 0.85 -1.1 1,943,370 - +0.5 1,943,434 + +0.6 1,943,631 - +0.5 1,943,754 + +0.5 1,943,754 + -0.5 1,943,754 + +1.5 1,943,754 + +1.2 1,943,754 + +0.5 1,943,755 - +1.5 1,943,755 - +0.7 1,943,755 - +0.3 1,943,755 - +0.7 1,943,755 - +1.0 1,943,755 - -1.1 1,943,758 + +0.5 1,943,758 + -0.7 1,943,758 + -1.0 1,943,758 + +0.5 1,943,758 + +0.0 1,943,758 + -2.5 1,943,759 - -1.1 1,943,759 - +0.5 1,944,037 - Pf1N1B4_1697 0.17 +1.8 1,944,337 + Pf1N1B4_1697 0.41 +0.5 1,944,337 + Pf1N1B4_1697 0.41 -2.1 1,944,337 + Pf1N1B4_1697 0.41 -0.5 1,944,338 - Pf1N1B4_1697 0.41 +2.0 1,944,417 - Pf1N1B4_1697 0.48 +1.5 1,944,417 - Pf1N1B4_1697 0.48 +1.2 1,944,417 - Pf1N1B4_1697 0.48 -0.1 1,944,565 - Pf1N1B4_1697 0.59 +1.2 1,944,709 + Pf1N1B4_1697 0.71 +1.0 1,944,709 + Pf1N1B4_1697 0.71 +1.0 1,944,709 + Pf1N1B4_1697 0.71 +0.5 1,944,710 - Pf1N1B4_1697 0.71 -0.5 1,944,710 - Pf1N1B4_1697 0.71 -0.5 1,944,710 - Pf1N1B4_1697 0.71 -0.1 1,944,710 - Pf1N1B4_1697 0.71 +2.6 1,944,710 - Pf1N1B4_1697 0.71 +0.3 1,944,710 - Pf1N1B4_1697 0.71 +0.5 1,944,710 - Pf1N1B4_1697 0.71 -1.5 1,944,710 - Pf1N1B4_1697 0.71 +0.7 1,944,785 + Pf1N1B4_1697 0.77 +1.0 1,945,006 + -0.5 1,945,006 + +0.1 1,945,006 + -1.1 1,945,007 - -1.5 1,945,025 - +1.2 1,945,246 + Pf1N1B4_1698 0.12 -0.5 1,945,247 - Pf1N1B4_1698 0.12 -2.1 1,945,290 + Pf1N1B4_1698 0.15 -0.4 1,945,291 - Pf1N1B4_1698 0.15 -1.9 1,945,291 - Pf1N1B4_1698 0.15 -1.1 1,945,389 + Pf1N1B4_1698 0.24 -0.8 1,945,389 + Pf1N1B4_1698 0.24 +0.0 1,945,389 + Pf1N1B4_1698 0.24 -0.8 1,945,390 - Pf1N1B4_1698 0.24 +1.0 1,945,390 - Pf1N1B4_1698 0.24 +0.5 1,945,390 - Pf1N1B4_1698 0.24 -0.5 1,945,444 - Pf1N1B4_1698 0.28 +1.0 1,945,572 + Pf1N1B4_1698 0.39 +1.2 1,945,591 - -0.5 1,945,591 - Pf1N1B4_1698 0.41 +0.7 1,945,746 + Pf1N1B4_1698 0.54 +0.5 1,945,746 + Pf1N1B4_1698 0.54 +0.3 1,945,746 + Pf1N1B4_1698 0.54 -1.1 1,945,746 + Pf1N1B4_1698 0.54 +1.0 1,945,747 - Pf1N1B4_1698 0.54 +2.5 1,945,747 - Pf1N1B4_1698 0.54 +1.0 1,945,747 - Pf1N1B4_1698 0.54 -0.3 1,945,747 - Pf1N1B4_1698 0.54 -1.5 1,945,863 + Pf1N1B4_1698 0.63 +0.0 1,945,863 + Pf1N1B4_1698 0.63 +0.5 1,945,864 - Pf1N1B4_1698 0.63 -2.3 1,945,864 - Pf1N1B4_1698 0.63 -0.8
Or see this region's nucleotide sequence