Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_1331 and Pf1N1B4_1332 overlap by 8 nucleotides Pf1N1B4_1332 and Pf1N1B4_1333 overlap by 4 nucleotides
Pf1N1B4_1331 - Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-), at 1,526,124 to 1,527,335
_1331
Pf1N1B4_1332 - Cobalt-precorrin-6 synthase, anaerobic, at 1,527,328 to 1,528,425
_1332
Pf1N1B4_1333 - Cobalt-precorrin-6x reductase (EC 1.3.1.54), at 1,528,422 to 1,529,156
_1333
Position (kb)
1527
1528
1529 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1526.339 kb on - strand, within Pf1N1B4_1331 at 1526.482 kb on + strand, within Pf1N1B4_1331 at 1526.483 kb on - strand, within Pf1N1B4_1331 at 1526.914 kb on + strand at 1526.915 kb on - strand, within Pf1N1B4_1331 at 1526.915 kb on - strand, within Pf1N1B4_1331 at 1526.915 kb on - strand, within Pf1N1B4_1331 at 1527.116 kb on - strand, within Pf1N1B4_1331 at 1527.116 kb on - strand, within Pf1N1B4_1331 at 1527.123 kb on - strand, within Pf1N1B4_1331 at 1527.123 kb on - strand, within Pf1N1B4_1331 at 1527.217 kb on - strand at 1527.299 kb on + strand at 1527.299 kb on + strand at 1527.300 kb on - strand at 1527.300 kb on - strand at 1527.757 kb on + strand, within Pf1N1B4_1332 at 1527.901 kb on + strand, within Pf1N1B4_1332 at 1527.902 kb on - strand, within Pf1N1B4_1332 at 1528.007 kb on - strand, within Pf1N1B4_1332 at 1528.007 kb on - strand, within Pf1N1B4_1332 at 1528.252 kb on - strand, within Pf1N1B4_1332 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand, within Pf1N1B4_1333 at 1528.497 kb on + strand at 1528.498 kb on - strand, within Pf1N1B4_1333 at 1528.498 kb on - strand, within Pf1N1B4_1333 at 1528.498 kb on - strand, within Pf1N1B4_1333 at 1528.498 kb on - strand, within Pf1N1B4_1333 at 1528.498 kb on - strand, within Pf1N1B4_1333 at 1528.498 kb on - strand, within Pf1N1B4_1333 at 1529.139 kb on + strand at 1529.139 kb on + strand at 1529.139 kb on + strand at 1529.140 kb on - strand at 1529.140 kb on - strand at 1529.140 kb on - strand at 1529.154 kb on + strand at 1529.154 kb on + strand at 1529.154 kb on + strand at 1529.154 kb on + strand at 1529.154 kb on + strand at 1529.154 kb on + strand at 1529.155 kb on - strand at 1529.155 kb on - strand at 1529.155 kb on - strand at 1529.155 kb on - strand at 1529.158 kb on + strand at 1529.158 kb on + strand at 1529.159 kb on - strand at 1529.277 kb on + strand at 1529.278 kb on - strand at 1529.363 kb on + strand at 1529.363 kb on + strand at 1529.364 kb on - strand at 1529.364 kb on - strand at 1529.364 kb on - strand at 1529.364 kb on - strand at 1529.385 kb on + strand at 1529.385 kb on + strand at 1529.385 kb on + strand at 1529.385 kb on + strand at 1529.385 kb on + strand at 1529.385 kb on + strand at 1529.386 kb on - strand at 1529.386 kb on - strand at 1529.389 kb on + strand at 1529.390 kb on - strand at 1529.390 kb on - strand at 1529.390 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,526,339 - Pf1N1B4_1331 0.18 +1.0 1,526,482 + Pf1N1B4_1331 0.30 -0.8 1,526,483 - Pf1N1B4_1331 0.30 -1.0 1,526,914 + +1.2 1,526,915 - Pf1N1B4_1331 0.65 +1.4 1,526,915 - Pf1N1B4_1331 0.65 -0.0 1,526,915 - Pf1N1B4_1331 0.65 -0.1 1,527,116 - Pf1N1B4_1331 0.82 +2.0 1,527,116 - Pf1N1B4_1331 0.82 +0.8 1,527,123 - Pf1N1B4_1331 0.82 -1.1 1,527,123 - Pf1N1B4_1331 0.82 +1.2 1,527,217 - +0.2 1,527,299 + +0.2 1,527,299 + +0.2 1,527,300 - +0.5 1,527,300 - +0.2 1,527,757 + Pf1N1B4_1332 0.39 -0.2 1,527,901 + Pf1N1B4_1332 0.52 -0.8 1,527,902 - Pf1N1B4_1332 0.52 +0.6 1,528,007 - Pf1N1B4_1332 0.62 +2.2 1,528,007 - Pf1N1B4_1332 0.62 +1.1 1,528,252 - Pf1N1B4_1332 0.84 +1.2 1,528,497 + Pf1N1B4_1333 0.10 -0.3 1,528,497 + Pf1N1B4_1333 0.10 +1.8 1,528,497 + Pf1N1B4_1333 0.10 -0.2 1,528,497 + Pf1N1B4_1333 0.10 +1.5 1,528,497 + Pf1N1B4_1333 0.10 -0.1 1,528,497 + Pf1N1B4_1333 0.10 +0.2 1,528,497 + Pf1N1B4_1333 0.10 +2.6 1,528,497 + Pf1N1B4_1333 0.10 -0.3 1,528,497 + Pf1N1B4_1333 0.10 -2.1 1,528,497 + Pf1N1B4_1333 0.10 +0.5 1,528,497 + Pf1N1B4_1333 0.10 -1.8 1,528,497 + Pf1N1B4_1333 0.10 -0.4 1,528,497 + Pf1N1B4_1333 0.10 -1.1 1,528,497 + Pf1N1B4_1333 0.10 -0.2 1,528,497 + Pf1N1B4_1333 0.10 -1.3 1,528,497 + -2.3 1,528,498 - Pf1N1B4_1333 0.10 +0.2 1,528,498 - Pf1N1B4_1333 0.10 +1.7 1,528,498 - Pf1N1B4_1333 0.10 -2.1 1,528,498 - Pf1N1B4_1333 0.10 +1.1 1,528,498 - Pf1N1B4_1333 0.10 -0.1 1,528,498 - Pf1N1B4_1333 0.10 -1.8 1,529,139 + -0.6 1,529,139 + -0.5 1,529,139 + +0.2 1,529,140 - +0.8 1,529,140 - +0.6 1,529,140 - +0.9 1,529,154 + -0.0 1,529,154 + +1.8 1,529,154 + -0.2 1,529,154 + +0.2 1,529,154 + +0.8 1,529,154 + -0.2 1,529,155 - +1.6 1,529,155 - +1.8 1,529,155 - -0.8 1,529,155 - +2.0 1,529,158 + +0.5 1,529,158 + -0.5 1,529,159 - -1.3 1,529,277 + +1.0 1,529,278 - -2.1 1,529,363 + +0.7 1,529,363 + +0.9 1,529,364 - -0.8 1,529,364 - -0.0 1,529,364 - -0.0 1,529,364 - +0.8 1,529,385 + +0.2 1,529,385 + -1.2 1,529,385 + +2.8 1,529,385 + +1.7 1,529,385 + -1.0 1,529,385 + +0.2 1,529,386 - +0.7 1,529,386 - +1.5 1,529,389 + -0.2 1,529,390 - -0.6 1,529,390 - -2.1 1,529,390 - +0.6
Or see this region's nucleotide sequence