Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_99 and Pf1N1B4_100 are separated by 308 nucleotides Pf1N1B4_100 and Pf1N1B4_101 are separated by 64 nucleotides Pf1N1B4_101 and Pf1N1B4_102 are separated by 374 nucleotides
Pf1N1B4_99 - Purine nucleoside permease, at 104,512 to 105,546
_99
Pf1N1B4_100 - FIG00953437: hypothetical protein, at 105,855 to 106,082
_100
Pf1N1B4_101 - hypothetical protein, at 106,147 to 106,311
_101
Pf1N1B4_102 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 106,686 to 108,446
_102
Position (kb)
106
107 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 105.192 kb on + strand, within Pf1N1B4_99 at 105.192 kb on + strand, within Pf1N1B4_99 at 105.255 kb on + strand, within Pf1N1B4_99 at 105.268 kb on + strand, within Pf1N1B4_99 at 105.268 kb on + strand, within Pf1N1B4_99 at 105.269 kb on - strand, within Pf1N1B4_99 at 105.301 kb on + strand, within Pf1N1B4_99 at 105.301 kb on + strand, within Pf1N1B4_99 at 105.301 kb on + strand, within Pf1N1B4_99 at 105.301 kb on + strand, within Pf1N1B4_99 at 105.301 kb on + strand, within Pf1N1B4_99 at 105.302 kb on - strand at 105.302 kb on - strand, within Pf1N1B4_99 at 105.428 kb on - strand at 105.657 kb on + strand at 105.657 kb on + strand at 105.657 kb on + strand at 105.658 kb on - strand at 105.791 kb on - strand at 105.828 kb on - strand at 105.828 kb on - strand at 105.829 kb on + strand at 105.830 kb on - strand at 105.830 kb on - strand at 105.833 kb on + strand at 105.833 kb on + strand at 105.833 kb on + strand at 105.834 kb on - strand at 105.834 kb on - strand at 105.834 kb on - strand at 105.834 kb on - strand at 105.834 kb on - strand at 105.834 kb on - strand at 105.834 kb on - strand at 105.834 kb on - strand at 105.845 kb on + strand at 105.846 kb on - strand at 105.854 kb on + strand at 105.885 kb on + strand, within Pf1N1B4_100 at 105.885 kb on + strand, within Pf1N1B4_100 at 105.885 kb on + strand, within Pf1N1B4_100 at 105.886 kb on - strand, within Pf1N1B4_100 at 106.226 kb on + strand, within Pf1N1B4_101 at 106.226 kb on + strand, within Pf1N1B4_101 at 106.227 kb on - strand, within Pf1N1B4_101 at 106.293 kb on + strand, within Pf1N1B4_101 at 106.424 kb on + strand at 106.424 kb on + strand at 106.424 kb on + strand at 106.424 kb on + strand at 106.428 kb on - strand at 106.428 kb on - strand at 106.501 kb on + strand at 106.502 kb on - strand at 106.549 kb on + strand at 106.550 kb on - strand at 106.677 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 105,192 + Pf1N1B4_99 0.66 +0.2 105,192 + Pf1N1B4_99 0.66 +1.6 105,255 + Pf1N1B4_99 0.72 +0.0 105,268 + Pf1N1B4_99 0.73 +0.5 105,268 + Pf1N1B4_99 0.73 -0.3 105,269 - Pf1N1B4_99 0.73 -1.7 105,301 + Pf1N1B4_99 0.76 -0.3 105,301 + Pf1N1B4_99 0.76 -1.5 105,301 + Pf1N1B4_99 0.76 +2.1 105,301 + Pf1N1B4_99 0.76 +1.3 105,301 + Pf1N1B4_99 0.76 -0.9 105,302 - -0.3 105,302 - Pf1N1B4_99 0.76 -0.9 105,428 - -0.3 105,657 + +1.4 105,657 + +0.2 105,657 + -1.0 105,658 - -0.3 105,791 - +1.1 105,828 - -1.3 105,828 - +0.4 105,829 + -0.6 105,830 - +0.0 105,830 - +0.7 105,833 + -0.3 105,833 + -0.8 105,833 + +1.0 105,834 - -0.3 105,834 - -0.6 105,834 - +0.2 105,834 - +2.1 105,834 - +0.1 105,834 - +0.0 105,834 - +0.7 105,834 - -1.2 105,845 + +0.2 105,846 - +1.7 105,854 + -0.1 105,885 + Pf1N1B4_100 0.13 +1.7 105,885 + Pf1N1B4_100 0.13 +0.1 105,885 + Pf1N1B4_100 0.13 +1.6 105,886 - Pf1N1B4_100 0.14 -0.6 106,226 + Pf1N1B4_101 0.48 -1.6 106,226 + Pf1N1B4_101 0.48 -1.8 106,227 - Pf1N1B4_101 0.48 +0.6 106,293 + Pf1N1B4_101 0.88 -1.6 106,424 + +0.1 106,424 + +0.7 106,424 + +1.9 106,424 + +0.2 106,428 - +0.7 106,428 - -0.3 106,501 + +0.7 106,502 - -2.6 106,549 + +0.5 106,550 - -1.3 106,677 + +0.4
Or see this region's nucleotide sequence