Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_461

Experiment: Aluminum chloride 4 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_459 and Ac3H11_460 are separated by 91 nucleotidesAc3H11_460 and Ac3H11_461 are separated by 20 nucleotidesAc3H11_461 and Ac3H11_462 are separated by 137 nucleotides Ac3H11_459 - Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1), at 149,815 to 150,597 _459 Ac3H11_460 - Phosphate transport system regulatory protein PhoU, at 150,689 to 151,390 _460 Ac3H11_461 - Phosphate regulon transcriptional regulatory protein PhoB (SphR), at 151,411 to 152,121 _461 Ac3H11_462 - Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3), at 152,259 to 153,602 _462 Position (kb) 151 152 153Strain fitness (log2 ratio) -2 -1 0 1 2at 150.431 kb on - strand, within Ac3H11_459at 150.485 kb on - strand, within Ac3H11_459at 150.485 kb on - strand, within Ac3H11_459at 150.485 kb on - strand, within Ac3H11_459at 150.494 kb on - strand, within Ac3H11_459at 150.494 kb on - strand, within Ac3H11_459at 150.494 kb on - strand, within Ac3H11_459at 150.494 kb on - strand, within Ac3H11_459at 150.494 kb on - strand, within Ac3H11_459at 150.500 kb on - strand, within Ac3H11_459at 150.500 kb on - strand, within Ac3H11_459at 150.500 kb on - strand, within Ac3H11_459at 150.574 kb on + strandat 150.575 kb on - strandat 150.615 kb on - strandat 150.619 kb on - strandat 150.681 kb on + strandat 150.681 kb on + strandat 150.682 kb on - strandat 150.682 kb on - strandat 150.797 kb on + strand, within Ac3H11_460at 150.798 kb on - strand, within Ac3H11_460at 150.798 kb on - strand, within Ac3H11_460at 151.215 kb on - strand, within Ac3H11_460at 151.215 kb on - strand, within Ac3H11_460at 151.215 kb on - strand, within Ac3H11_460at 151.215 kb on - strand, within Ac3H11_460at 151.215 kb on - strand, within Ac3H11_460at 151.215 kb on - strand, within Ac3H11_460at 151.215 kb on - strand, within Ac3H11_460at 151.215 kb on - strand, within Ac3H11_460at 151.326 kb on - strandat 151.326 kb on - strandat 151.326 kb on - strandat 151.326 kb on - strandat 151.326 kb on - strandat 151.410 kb on + strandat 151.410 kb on + strandat 151.410 kb on + strandat 151.410 kb on + strandat 151.411 kb on - strandat 151.720 kb on + strand, within Ac3H11_461at 151.720 kb on + strand, within Ac3H11_461at 151.720 kb on + strand, within Ac3H11_461at 151.847 kb on - strand, within Ac3H11_461at 151.847 kb on - strand, within Ac3H11_461at 151.858 kb on + strand, within Ac3H11_461at 151.888 kb on - strand, within Ac3H11_461at 151.938 kb on + strand, within Ac3H11_461at 152.176 kb on + strandat 152.177 kb on - strandat 152.177 kb on - strandat 152.204 kb on - strandat 152.204 kb on - strandat 152.277 kb on + strandat 152.277 kb on + strandat 152.712 kb on + strand, within Ac3H11_462at 152.713 kb on - strand, within Ac3H11_462

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM
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150,431 - Ac3H11_459 0.79 +0.6
150,485 - Ac3H11_459 0.86 -1.5
150,485 - Ac3H11_459 0.86 +0.5
150,485 - Ac3H11_459 0.86 -1.6
150,494 - Ac3H11_459 0.87 -0.3
150,494 - Ac3H11_459 0.87 -0.1
150,494 - Ac3H11_459 0.87 -0.9
150,494 - Ac3H11_459 0.87 +2.3
150,494 - Ac3H11_459 0.87 +1.2
150,500 - Ac3H11_459 0.87 +0.9
150,500 - Ac3H11_459 0.87 +1.8
150,500 - Ac3H11_459 0.87 +0.7
150,574 + +1.3
150,575 - +1.8
150,615 - +1.3
150,619 - +0.6
150,681 + -1.5
150,681 + +0.2
150,682 - -0.1
150,682 - +1.1
150,797 + Ac3H11_460 0.15 -0.2
150,798 - Ac3H11_460 0.16 +0.3
150,798 - Ac3H11_460 0.16 +0.5
151,215 - Ac3H11_460 0.75 -0.5
151,215 - Ac3H11_460 0.75 -0.2
151,215 - Ac3H11_460 0.75 +0.1
151,215 - Ac3H11_460 0.75 +1.2
151,215 - Ac3H11_460 0.75 +0.7
151,215 - Ac3H11_460 0.75 +0.0
151,215 - Ac3H11_460 0.75 +0.3
151,215 - Ac3H11_460 0.75 +0.4
151,326 - -0.2
151,326 - +0.7
151,326 - +1.5
151,326 - -1.0
151,326 - +0.4
151,410 + +0.3
151,410 + -0.2
151,410 + +0.8
151,410 + -0.0
151,411 - +0.1
151,720 + Ac3H11_461 0.43 -2.7
151,720 + Ac3H11_461 0.43 -0.3
151,720 + Ac3H11_461 0.43 +0.7
151,847 - Ac3H11_461 0.61 -0.5
151,847 - Ac3H11_461 0.61 -0.8
151,858 + Ac3H11_461 0.63 -0.2
151,888 - Ac3H11_461 0.67 +1.5
151,938 + Ac3H11_461 0.74 +0.1
152,176 + +0.3
152,177 - +0.6
152,177 - +2.6
152,204 - -1.5
152,204 - -0.5
152,277 + +0.3
152,277 + -0.5
152,712 + Ac3H11_462 0.34 +0.2
152,713 - Ac3H11_462 0.34 +0.8

Or see this region's nucleotide sequence