Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12220

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
2,687,980	+		AO353_12215	0.54	+0.1
2,687,980	+		AO353_12215	0.54	-1.5
2,687,980	+		AO353_12215	0.54	-0.2
2,687,981	-		AO353_12215	0.54	+0.8
2,687,981	-		AO353_12215	0.54	+0.4
2,687,981	-		AO353_12215	0.54	-0.1
2,688,093	+		AO353_12215	0.60	-0.4
2,688,093	+		AO353_12215	0.60	+0.2
2,688,093	+		AO353_12215	0.60	-0.4
2,688,094	-		AO353_12215	0.60	+0.5
2,688,094	-		AO353_12215	0.60	-0.5
2,688,383	+		AO353_12215	0.75	-0.2
2,688,432	+		AO353_12215	0.78	+0.1
2,688,432	+		AO353_12215	0.78	-0.5
2,688,432	+		AO353_12215	0.78	+0.2
2,688,432	+		AO353_12215	0.78	-0.2
2,688,433	-		AO353_12215	0.78	-0.1
2,688,433	-		AO353_12215	0.78	-0.5
2,688,433	-		AO353_12215	0.78	-1.1
2,688,433	-		AO353_12215	0.78	-1.7
2,688,433	-		AO353_12215	0.78	-1.7
2,688,433	-		AO353_12215	0.78	-0.3
2,688,433	-		AO353_12215	0.78	-0.4
2,688,433	-		AO353_12215	0.78	-0.5
2,688,477	+		AO353_12215	0.80	+0.3
2,688,478	-		AO353_12215	0.80	+1.1
2,688,478	-		AO353_12215	0.80	+0.3
2,688,478	-		AO353_12215	0.80	+0.3
2,688,501	+		AO353_12215	0.81	+0.3
2,688,561	+		AO353_12215	0.84	+0.3
2,688,561	+		AO353_12215	0.84	+0.5
2,688,561	+		AO353_12215	0.84	+0.3
2,688,561	+		AO353_12215	0.84	+0.3
2,688,562	-		AO353_12215	0.84	-1.3
2,688,562	-		AO353_12215	0.84	+0.0
2,688,562	-		AO353_12215	0.84	-0.4
2,688,585	+		AO353_12215	0.86	-0.8
2,688,585	+		AO353_12215	0.86	-0.2
2,688,585	+		AO353_12215	0.86	+1.8
2,688,586	-		AO353_12215	0.86	+0.2
2,688,586	-		AO353_12215	0.86	+0.5
2,688,586	-		AO353_12215	0.86	+0.2
2,688,866	+				-2.4
2,688,866	+				+1.2
2,688,866	+				-0.0
2,688,867	-				-0.1
2,688,939	+				-1.2
2,688,939	+				-1.2
2,688,939	+				+1.1
2,688,939	+				+0.4
2,688,939	+				+1.3
2,688,939	+				-2.1
2,688,939	+				+0.3
2,688,939	+				+0.9
2,688,939	+				-1.7
2,688,940	-				-0.2
2,688,940	-				+0.3
2,688,940	-				-1.5
2,688,940	-				+0.6
2,688,940	-				+0.5
2,688,940	-				-0.7
2,688,940	-				-0.1
2,688,940	-				-0.1
2,688,940	-				-0.3
2,688,940	-				+0.0
2,688,940	-				+2.3
2,688,965	+		AO353_12220	0.15	+1.0
2,688,966	-		AO353_12220	0.16	+0.3
2,689,042	+		AO353_12220	0.58	-0.5
2,689,043	-		AO353_12220	0.58	+1.8
2,689,043	-		AO353_12220	0.58	+0.2
2,689,096	+		AO353_12220	0.88	+0.3
2,689,096	+		AO353_12220	0.88	+0.6
2,689,096	+		AO353_12220	0.88	+0.5
2,689,096	+		AO353_12220	0.88	+0.9
2,689,096	+		AO353_12220	0.88	-1.4
2,689,096	+		AO353_12220	0.88	+0.6
2,689,096	+		AO353_12220	0.88	+0.7
2,689,096	+		AO353_12220	0.88	-0.2
2,689,096	+		AO353_12220	0.88	+1.3
2,689,096	+		AO353_12220	0.88	+1.1
2,689,096	+		AO353_12220	0.88	-0.4
2,689,096	+		AO353_12220	0.88	+2.3
2,689,096	+		AO353_12220	0.88	-1.5
2,689,096	+		AO353_12220	0.88	+0.2
2,689,097	-		AO353_12220	0.88	+0.6
2,689,097	-		AO353_12220	0.88	+2.3
2,689,097	-		AO353_12220	0.88	+0.0
2,689,097	-		AO353_12220	0.88	+0.2
2,689,097	-		AO353_12220	0.88	-0.7
2,689,097	-		AO353_12220	0.88	+0.8
2,689,097	-		AO353_12220	0.88	-0.7
2,689,097	-		AO353_12220	0.88	-0.2
2,689,097	-		AO353_12220	0.88	-2.4
2,689,097	-		AO353_12220	0.88	+2.3
2,689,097	-		AO353_12220	0.88	-0.2
2,689,097	-		AO353_12220	0.88	+0.0
2,689,141	+				-0.4
2,689,141	+				-2.2
2,689,141	+				+1.2
2,689,141	+				-0.1
2,689,141	+				-1.5
2,689,141	+				+0.3
2,689,141	+				-0.2
2,689,141	+				+0.5
2,689,142	-				-0.8
2,689,142	-				-0.5
2,689,142	-				+0.3
2,689,142	-				+1.0
2,689,142	-				+2.1
2,689,142	-				+1.9
2,689,142	-				+0.8
2,689,142	-				-1.5
2,689,162	-				-0.8
2,689,162	-				-1.1
2,689,162	-				-0.2
2,689,222	+		AO353_12225	0.29	+0.2
2,689,222	+		AO353_12225	0.29	+1.9
2,689,223	-		AO353_12225	0.30	-1.0
2,689,223	-		AO353_12225	0.30	-2.1
2,689,276	-		AO353_12225	0.51	-0.7
2,689,317	+		AO353_12225	0.67	-1.7
2,689,318	-		AO353_12225	0.67	-0.1
2,689,318	-		AO353_12225	0.67	-0.5
2,689,341	+		AO353_12225	0.76	+0.2
2,689,342	-		AO353_12225	0.76	-0.7
2,689,342	-		AO353_12225	0.76	-0.4
2,689,399	+				+0.5
2,689,400	-				-0.5
2,689,400	-				+1.3
2,689,400	-				-0.4
2,689,431	+				-0.2
2,689,431	+				-1.2
2,689,431	+				-0.6
2,689,432	-				-0.9
2,689,446	+				-0.3
2,689,446	+				+0.7
2,689,449	+				-0.6
2,689,449	+				-0.2
2,689,449	+				+1.3
2,689,449	+				-0.3
2,689,449	+				-0.7
2,689,449	+				+0.8
2,689,449	+				-0.5
2,689,449	+				-2.1
2,689,449	+				-0.7
2,689,449	+				+0.9
2,689,449	+				-0.5
2,689,449	+				+0.6
2,689,449	+				-1.0
2,689,449	+				+0.3
2,689,450	-				-0.2
2,689,526	-		AO353_12230	0.16	+0.5
2,689,544	+		AO353_12230	0.19	-0.1
2,689,552	+		AO353_12230	0.21	+0.4
2,689,552	+		AO353_12230	0.21	+0.4
2,689,552	+		AO353_12230	0.21	+0.0
2,689,553	-		AO353_12230	0.21	-2.5
2,689,553	-		AO353_12230	0.21	-1.6
2,689,553	-		AO353_12230	0.21	-0.5
2,689,553	-		AO353_12230	0.21	-0.8
2,689,560	-		AO353_12230	0.22	-0.8
2,689,583	+		AO353_12230	0.26	-1.1
2,689,583	+		AO353_12230	0.26	+0.4
2,689,583	+		AO353_12230	0.26	-1.2
2,689,583	+		AO353_12230	0.26	-1.4
2,689,584	-		AO353_12230	0.26	-1.0
2,689,584	-		AO353_12230	0.26	-1.2
2,689,594	+		AO353_12230	0.28	+0.3
2,689,594	+		AO353_12230	0.28	-1.1
2,689,594	+		AO353_12230	0.28	+0.2
2,689,595	-		AO353_12230	0.28	-0.2
2,689,619	+		AO353_12230	0.33	-0.6
2,689,619	+		AO353_12230	0.33	-1.5
2,689,619	+		AO353_12230	0.33	-0.1
2,689,619	+		AO353_12230	0.33	+0.0
2,689,620	-		AO353_12230	0.33	+0.8
2,689,620	-		AO353_12230	0.33	-0.7
2,689,620	-		AO353_12230	0.33	+0.8
2,689,620	-		AO353_12230	0.33	-0.2
2,689,620	-		AO353_12230	0.33	+0.4
2,689,620	-		AO353_12230	0.33	-2.1
2,689,620	-		AO353_12230	0.33	+2.3
2,689,620	-		AO353_12230	0.33	-0.4
2,689,792	+		AO353_12230	0.63	-0.8
2,689,792	+		AO353_12230	0.63	-1.0
2,689,793	-		AO353_12230	0.63	-1.5
2,689,793	-		AO353_12230	0.63	+0.3
2,689,793	-		AO353_12230	0.63	-0.4
2,689,793	-		AO353_12230	0.63	-0.5
2,689,793	-		AO353_12230	0.63	-0.5
2,689,796	+		AO353_12230	0.64	-0.2
2,689,797	-		AO353_12230	0.64	+0.6
2,689,797	-		AO353_12230	0.64	+0.5
2,689,797	-		AO353_12230	0.64	+1.3
2,689,797	-		AO353_12230	0.64	-0.2
2,689,797	-		AO353_12230	0.64	-0.6
2,689,808	+		AO353_12230	0.66	-0.2
2,689,808	+		AO353_12230	0.66	-2.6
2,689,808	+		AO353_12230	0.66	-0.5
2,689,808	+		AO353_12230	0.66	-0.8
2,689,808	+		AO353_12230	0.66	-0.2
2,689,808	+		AO353_12230	0.66	-0.3
2,689,808	+		AO353_12230	0.66	-0.1
2,689,808	+		AO353_12230	0.66	-0.2
2,689,808	+		AO353_12230	0.66	+0.5
2,689,808	+		AO353_12230	0.66	-0.8
2,689,809	-		AO353_12230	0.66	-0.2
2,689,809	-		AO353_12230	0.66	-0.2
2,689,809	-		AO353_12230	0.66	-0.5
2,689,809	-		AO353_12230	0.66	+1.3
2,689,809	-		AO353_12230	0.66	+0.0
2,689,809	-		AO353_12230	0.66	+0.6
2,689,809	-		AO353_12230	0.66	+1.0
2,689,809	-		AO353_12230	0.66	+0.1
2,689,809	-		AO353_12230	0.66	-0.7
2,689,809	-		AO353_12230	0.66	-1.4
2,689,809	-		AO353_12230	0.66	-0.1
2,689,809	-		AO353_12230	0.66	-0.3
2,689,809	-		AO353_12230	0.66	+0.3
2,689,809	-		AO353_12230	0.66	-2.4
2,689,823	+		AO353_12230	0.68	-1.1
2,689,823	+		AO353_12230	0.68	-0.7
2,689,824	-		AO353_12230	0.69	-0.5
2,689,940	+		AO353_12230	0.89	+1.2
2,689,941	-		AO353_12230	0.89	+1.5
2,689,941	-		AO353_12230	0.89	+0.1
2,690,000	+				+0.3
2,690,000	+				+1.0
2,690,001	-				-0.2
2,690,001	-				+0.3
2,690,001	-				-0.2