Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08865 and AO353_08870 overlap by 4 nucleotides AO353_08870 and AO353_08875 overlap by 14 nucleotides AO353_08875 and AO353_08880 are separated by 258 nucleotides
AO353_08865: AO353_08865 - ABC transporter permease, at 1,947,906 to 1,948,574
_08865
AO353_08870: AO353_08870 - amino acid ABC transporter permease, at 1,948,571 to 1,949,221
_08870
AO353_08875: AO353_08875 - amino acid ABC transporter ATP-binding protein, at 1,949,208 to 1,949,945
_08875
AO353_08880: AO353_08880 - exopolyphosphatase, at 1,950,204 to 1,951,706
_08880
Position (kb) 1949
1950 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1948.477 kb on - strand, within AO353_08865 at 1948.477 kb on - strand, within AO353_08865 at 1948.477 kb on - strand, within AO353_08865 at 1948.477 kb on - strand, within AO353_08865 at 1948.477 kb on - strand, within AO353_08865 at 1948.477 kb on - strand, within AO353_08865 at 1948.477 kb on - strand, within AO353_08865 at 1948.477 kb on - strand, within AO353_08865 at 1948.497 kb on + strand, within AO353_08865 at 1948.497 kb on + strand, within AO353_08865 at 1948.497 kb on + strand, within AO353_08865 at 1948.497 kb on + strand, within AO353_08865 at 1948.497 kb on + strand, within AO353_08865 at 1948.497 kb on + strand, within AO353_08865 at 1948.497 kb on + strand, within AO353_08865 at 1948.498 kb on - strand, within AO353_08865 at 1948.498 kb on - strand, within AO353_08865 at 1948.498 kb on - strand, within AO353_08865 at 1948.498 kb on - strand, within AO353_08865 at 1948.498 kb on - strand, within AO353_08865 at 1948.529 kb on - strand at 1948.551 kb on + strand at 1948.551 kb on + strand at 1948.552 kb on - strand at 1948.552 kb on - strand at 1948.696 kb on + strand, within AO353_08870 at 1948.696 kb on + strand, within AO353_08870 at 1948.696 kb on + strand, within AO353_08870 at 1948.697 kb on - strand, within AO353_08870 at 1948.697 kb on - strand, within AO353_08870 at 1948.697 kb on - strand, within AO353_08870 at 1948.697 kb on - strand, within AO353_08870 at 1948.736 kb on + strand, within AO353_08870 at 1948.736 kb on + strand, within AO353_08870 at 1948.736 kb on + strand, within AO353_08870 at 1948.736 kb on + strand, within AO353_08870 at 1948.736 kb on + strand, within AO353_08870 at 1948.736 kb on + strand, within AO353_08870 at 1948.736 kb on + strand, within AO353_08870 at 1948.736 kb on + strand, within AO353_08870 at 1948.736 kb on + strand, within AO353_08870 at 1948.736 kb on + strand, within AO353_08870 at 1948.737 kb on - strand, within AO353_08870 at 1948.737 kb on - strand, within AO353_08870 at 1948.737 kb on - strand, within AO353_08870 at 1948.737 kb on - strand, within AO353_08870 at 1948.737 kb on - strand, within AO353_08870 at 1948.737 kb on - strand, within AO353_08870 at 1948.737 kb on - strand, within AO353_08870 at 1948.737 kb on - strand, within AO353_08870 at 1948.858 kb on + strand, within AO353_08870 at 1948.859 kb on - strand, within AO353_08870 at 1948.868 kb on + strand, within AO353_08870 at 1948.868 kb on + strand, within AO353_08870 at 1948.869 kb on - strand, within AO353_08870 at 1949.130 kb on - strand, within AO353_08870 at 1949.150 kb on + strand, within AO353_08870 at 1949.150 kb on + strand, within AO353_08870 at 1949.150 kb on + strand, within AO353_08870 at 1949.151 kb on - strand, within AO353_08870 at 1949.220 kb on - strand at 1949.220 kb on - strand at 1949.237 kb on + strand at 1949.237 kb on + strand at 1949.237 kb on + strand at 1949.237 kb on + strand at 1949.237 kb on + strand at 1949.237 kb on + strand at 1949.237 kb on + strand at 1949.237 kb on + strand at 1949.237 kb on + strand at 1949.237 kb on + strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.238 kb on - strand at 1949.241 kb on + strand at 1949.241 kb on + strand at 1949.241 kb on + strand at 1949.241 kb on + strand at 1949.241 kb on + strand at 1949.241 kb on + strand at 1949.241 kb on + strand at 1949.241 kb on + strand at 1949.242 kb on - strand at 1949.242 kb on - strand at 1949.242 kb on - strand at 1949.242 kb on - strand at 1949.242 kb on - strand at 1949.242 kb on - strand at 1949.245 kb on - strand at 1949.403 kb on + strand, within AO353_08875 at 1949.403 kb on + strand, within AO353_08875 at 1949.403 kb on + strand, within AO353_08875 at 1949.404 kb on - strand, within AO353_08875 at 1949.993 kb on + strand at 1949.993 kb on + strand at 1949.993 kb on + strand at 1949.993 kb on + strand at 1950.020 kb on + strand at 1950.020 kb on + strand at 1950.021 kb on - strand at 1950.089 kb on + strand at 1950.090 kb on - strand at 1950.090 kb on - strand at 1950.121 kb on + strand at 1950.121 kb on + strand at 1950.122 kb on - strand at 1950.122 kb on - strand at 1950.122 kb on - strand at 1950.122 kb on - strand at 1950.122 kb on - strand at 1950.122 kb on - strand at 1950.122 kb on - strand at 1950.122 kb on - strand at 1950.122 kb on - strand at 1950.132 kb on + strand at 1950.132 kb on + strand at 1950.132 kb on + strand at 1950.133 kb on - strand at 1950.133 kb on - strand at 1950.133 kb on - strand at 1950.273 kb on - strand at 1950.576 kb on + strand, within AO353_08880 at 1950.577 kb on - strand, within AO353_08880 at 1950.577 kb on - strand, within AO353_08880 at 1950.774 kb on + strand, within AO353_08880 at 1950.774 kb on + strand, within AO353_08880 at 1950.776 kb on + strand, within AO353_08880
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,948,477 - AO353_08865 0.85 -0.7 1,948,477 - AO353_08865 0.85 -0.6 1,948,477 - AO353_08865 0.85 +0.3 1,948,477 - AO353_08865 0.85 +0.1 1,948,477 - AO353_08865 0.85 +1.2 1,948,477 - AO353_08865 0.85 -0.2 1,948,477 - AO353_08865 0.85 +0.1 1,948,477 - AO353_08865 0.85 +2.4 1,948,497 + AO353_08865 0.88 -1.4 1,948,497 + AO353_08865 0.88 +0.6 1,948,497 + AO353_08865 0.88 -0.6 1,948,497 + AO353_08865 0.88 +0.8 1,948,497 + AO353_08865 0.88 -0.4 1,948,497 + AO353_08865 0.88 -1.2 1,948,497 + AO353_08865 0.88 +1.0 1,948,498 - AO353_08865 0.88 -1.0 1,948,498 - AO353_08865 0.88 -0.0 1,948,498 - AO353_08865 0.88 +0.5 1,948,498 - AO353_08865 0.88 +1.1 1,948,498 - AO353_08865 0.88 +0.3 1,948,529 - -0.8 1,948,551 + +0.9 1,948,551 + -0.0 1,948,552 - +0.0 1,948,552 - +1.0 1,948,696 + AO353_08870 0.19 -0.2 1,948,696 + AO353_08870 0.19 -1.2 1,948,696 + AO353_08870 0.19 -1.5 1,948,697 - AO353_08870 0.19 +1.0 1,948,697 - AO353_08870 0.19 +0.4 1,948,697 - AO353_08870 0.19 +0.2 1,948,697 - AO353_08870 0.19 +0.5 1,948,736 + AO353_08870 0.25 +0.7 1,948,736 + AO353_08870 0.25 -0.6 1,948,736 + AO353_08870 0.25 +1.1 1,948,736 + AO353_08870 0.25 -1.5 1,948,736 + AO353_08870 0.25 +1.4 1,948,736 + AO353_08870 0.25 +0.3 1,948,736 + AO353_08870 0.25 -0.6 1,948,736 + AO353_08870 0.25 -0.7 1,948,736 + AO353_08870 0.25 +1.1 1,948,736 + AO353_08870 0.25 -0.4 1,948,737 - AO353_08870 0.25 -0.2 1,948,737 - AO353_08870 0.25 -1.0 1,948,737 - AO353_08870 0.25 +1.0 1,948,737 - AO353_08870 0.25 +0.0 1,948,737 - AO353_08870 0.25 +0.4 1,948,737 - AO353_08870 0.25 +0.1 1,948,737 - AO353_08870 0.25 +0.3 1,948,737 - AO353_08870 0.25 +1.4 1,948,858 + AO353_08870 0.44 -1.0 1,948,859 - AO353_08870 0.44 +0.5 1,948,868 + AO353_08870 0.46 -0.1 1,948,868 + AO353_08870 0.46 +0.6 1,948,869 - AO353_08870 0.46 +0.2 1,949,130 - AO353_08870 0.86 +0.6 1,949,150 + AO353_08870 0.89 +0.0 1,949,150 + AO353_08870 0.89 -1.0 1,949,150 + AO353_08870 0.89 +0.7 1,949,151 - AO353_08870 0.89 -1.0 1,949,220 - -1.2 1,949,220 - +1.0 1,949,237 + -1.4 1,949,237 + +0.0 1,949,237 + +1.6 1,949,237 + +0.4 1,949,237 + -1.2 1,949,237 + +1.4 1,949,237 + -0.2 1,949,237 + -0.6 1,949,237 + -0.3 1,949,237 + +2.7 1,949,238 - -0.7 1,949,238 - +0.2 1,949,238 - -1.9 1,949,238 - -0.4 1,949,238 - -0.1 1,949,238 - +1.4 1,949,238 - -0.3 1,949,238 - +1.9 1,949,238 - -1.0 1,949,238 - -0.4 1,949,238 - +1.4 1,949,238 - +0.1 1,949,238 - -0.3 1,949,238 - +0.5 1,949,238 - +0.0 1,949,241 + +1.0 1,949,241 + -0.8 1,949,241 + +1.4 1,949,241 + -0.3 1,949,241 + -0.4 1,949,241 + -1.2 1,949,241 + +0.2 1,949,241 + -0.3 1,949,242 - -0.5 1,949,242 - -0.4 1,949,242 - -0.1 1,949,242 - +0.0 1,949,242 - +0.1 1,949,242 - +0.5 1,949,245 - +0.4 1,949,403 + AO353_08875 0.26 -0.7 1,949,403 + AO353_08875 0.26 +0.2 1,949,403 + AO353_08875 0.26 -1.3 1,949,404 - AO353_08875 0.27 -0.4 1,949,993 + -0.6 1,949,993 + -0.8 1,949,993 + +0.0 1,949,993 + -0.2 1,950,020 + -0.4 1,950,020 + -0.4 1,950,021 - +1.4 1,950,089 + +0.6 1,950,090 - +0.4 1,950,090 - +0.4 1,950,121 + +0.4 1,950,121 + +0.3 1,950,122 - -0.6 1,950,122 - -0.5 1,950,122 - +0.4 1,950,122 - -0.4 1,950,122 - +1.0 1,950,122 - +0.0 1,950,122 - +0.6 1,950,122 - -0.5 1,950,122 - +0.4 1,950,132 + -0.6 1,950,132 + +0.3 1,950,132 + -0.4 1,950,133 - +1.6 1,950,133 - +0.0 1,950,133 - +1.1 1,950,273 - +0.0 1,950,576 + AO353_08880 0.25 -1.0 1,950,577 - AO353_08880 0.25 -0.8 1,950,577 - AO353_08880 0.25 -1.5 1,950,774 + AO353_08880 0.38 +2.0 1,950,774 + AO353_08880 0.38 +0.0 1,950,776 + AO353_08880 0.38 +0.0
Or see this region's nucleotide sequence