Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01255 and AO353_01260 are separated by 69 nucleotides AO353_01260 and AO353_01265 are separated by 60 nucleotides AO353_01265 and AO353_01270 are separated by 9 nucleotides
AO353_01255: AO353_01255 - hypothetical protein, at 275,360 to 276,235
_01255
AO353_01260: AO353_01260 - transcriptional regulator, at 276,305 to 277,099
_01260
AO353_01265: AO353_01265 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 277,160 to 277,789
_01265
AO353_01270: AO353_01270 - 2-dehydro-3-deoxygalactonokinase, at 277,799 to 278,794
_01270
Position (kb) 277
278 Strain fitness (log2 ratio) -2
-1
0
1
2 at 276.168 kb on - strand at 276.173 kb on + strand at 276.173 kb on + strand at 276.173 kb on + strand at 276.174 kb on - strand at 276.174 kb on - strand at 276.174 kb on - strand at 276.174 kb on - strand at 276.174 kb on - strand at 276.215 kb on + strand at 276.244 kb on + strand at 276.245 kb on - strand at 276.306 kb on + strand at 276.306 kb on + strand at 276.306 kb on + strand at 276.306 kb on + strand at 276.306 kb on + strand at 276.306 kb on + strand at 276.306 kb on + strand at 276.307 kb on - strand at 276.307 kb on - strand at 276.307 kb on - strand at 276.307 kb on - strand at 276.308 kb on + strand at 276.308 kb on + strand at 276.308 kb on + strand at 276.308 kb on + strand at 276.308 kb on + strand at 276.309 kb on - strand at 276.320 kb on + strand at 276.320 kb on + strand at 276.321 kb on - strand at 276.321 kb on - strand at 276.364 kb on + strand at 276.364 kb on + strand at 276.364 kb on + strand at 276.364 kb on + strand at 276.365 kb on - strand at 276.365 kb on - strand at 276.365 kb on - strand at 276.365 kb on - strand at 276.365 kb on - strand at 276.365 kb on - strand at 276.393 kb on + strand, within AO353_01260 at 276.393 kb on + strand, within AO353_01260 at 276.393 kb on + strand, within AO353_01260 at 276.393 kb on + strand, within AO353_01260 at 276.393 kb on + strand, within AO353_01260 at 276.394 kb on - strand, within AO353_01260 at 276.394 kb on - strand, within AO353_01260 at 276.394 kb on - strand, within AO353_01260 at 276.504 kb on + strand, within AO353_01260 at 276.505 kb on - strand, within AO353_01260 at 276.519 kb on + strand, within AO353_01260 at 276.519 kb on + strand, within AO353_01260 at 276.519 kb on + strand, within AO353_01260 at 276.519 kb on + strand, within AO353_01260 at 276.519 kb on + strand, within AO353_01260 at 276.519 kb on + strand, within AO353_01260 at 276.519 kb on + strand, within AO353_01260 at 276.520 kb on - strand, within AO353_01260 at 276.520 kb on - strand, within AO353_01260 at 276.520 kb on - strand, within AO353_01260 at 276.520 kb on - strand, within AO353_01260 at 276.520 kb on - strand, within AO353_01260 at 276.520 kb on - strand, within AO353_01260 at 276.520 kb on - strand, within AO353_01260 at 276.744 kb on + strand, within AO353_01260 at 276.744 kb on + strand, within AO353_01260 at 276.744 kb on + strand, within AO353_01260 at 276.744 kb on + strand, within AO353_01260 at 276.745 kb on - strand, within AO353_01260 at 276.745 kb on - strand, within AO353_01260 at 276.745 kb on - strand, within AO353_01260 at 276.745 kb on - strand, within AO353_01260 at 276.745 kb on - strand, within AO353_01260 at 276.745 kb on - strand, within AO353_01260 at 276.745 kb on - strand, within AO353_01260 at 276.816 kb on + strand, within AO353_01260 at 276.816 kb on + strand, within AO353_01260 at 276.817 kb on - strand, within AO353_01260 at 276.895 kb on - strand, within AO353_01260 at 276.978 kb on - strand, within AO353_01260 at 277.099 kb on + strand at 277.099 kb on + strand at 277.099 kb on + strand at 277.099 kb on + strand at 277.100 kb on - strand at 277.100 kb on - strand at 277.100 kb on - strand at 277.100 kb on - strand at 277.100 kb on - strand at 277.139 kb on - strand at 277.161 kb on + strand at 277.161 kb on + strand at 277.161 kb on + strand at 277.161 kb on + strand at 277.162 kb on - strand at 277.162 kb on - strand at 277.162 kb on - strand at 277.162 kb on - strand at 277.162 kb on - strand at 277.162 kb on - strand at 277.197 kb on + strand at 277.197 kb on + strand at 277.197 kb on + strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.352 kb on + strand, within AO353_01265 at 277.352 kb on + strand, within AO353_01265 at 277.353 kb on - strand, within AO353_01265 at 277.353 kb on - strand, within AO353_01265 at 277.476 kb on + strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.648 kb on - strand, within AO353_01265 at 277.698 kb on + strand, within AO353_01265 at 277.698 kb on + strand, within AO353_01265 at 277.699 kb on - strand, within AO353_01265 at 277.699 kb on - strand, within AO353_01265 at 277.800 kb on + strand at 277.801 kb on - strand at 277.913 kb on - strand, within AO353_01270 at 278.047 kb on - strand, within AO353_01270 at 278.047 kb on - strand, within AO353_01270 at 278.047 kb on - strand, within AO353_01270 at 278.440 kb on + strand, within AO353_01270 at 278.440 kb on + strand, within AO353_01270 at 278.520 kb on + strand, within AO353_01270 at 278.521 kb on - strand, within AO353_01270 at 278.742 kb on + strand at 278.742 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 276,168 - +0.7 276,173 + +0.3 276,173 + -1.4 276,173 + +0.8 276,174 - +0.3 276,174 - +0.2 276,174 - +1.3 276,174 - -0.6 276,174 - -0.6 276,215 + +1.0 276,244 + -1.1 276,245 - -1.2 276,306 + +0.4 276,306 + -0.1 276,306 + +0.7 276,306 + -0.9 276,306 + +0.5 276,306 + +0.3 276,306 + -1.3 276,307 - +0.2 276,307 - -0.2 276,307 - +0.7 276,307 - -1.2 276,308 + -0.8 276,308 + -1.3 276,308 + -0.4 276,308 + +0.7 276,308 + +1.7 276,309 - +1.7 276,320 + +0.2 276,320 + +1.7 276,321 - +0.3 276,321 - +1.2 276,364 + -0.1 276,364 + +1.1 276,364 + -0.9 276,364 + +1.1 276,365 - +0.4 276,365 - -0.5 276,365 - -0.3 276,365 - -0.0 276,365 - +0.2 276,365 - -0.5 276,393 + AO353_01260 0.11 +0.7 276,393 + AO353_01260 0.11 -0.4 276,393 + AO353_01260 0.11 -0.8 276,393 + AO353_01260 0.11 +1.3 276,393 + AO353_01260 0.11 +0.1 276,394 - AO353_01260 0.11 +0.6 276,394 - AO353_01260 0.11 -0.9 276,394 - AO353_01260 0.11 +0.7 276,504 + AO353_01260 0.25 -2.5 276,505 - AO353_01260 0.25 +0.2 276,519 + AO353_01260 0.27 -1.4 276,519 + AO353_01260 0.27 +0.2 276,519 + AO353_01260 0.27 -0.8 276,519 + AO353_01260 0.27 -0.8 276,519 + AO353_01260 0.27 +0.2 276,519 + AO353_01260 0.27 -0.1 276,519 + AO353_01260 0.27 -0.1 276,520 - AO353_01260 0.27 +0.1 276,520 - AO353_01260 0.27 +0.2 276,520 - AO353_01260 0.27 +1.7 276,520 - AO353_01260 0.27 +0.2 276,520 - AO353_01260 0.27 +1.7 276,520 - AO353_01260 0.27 -0.3 276,520 - AO353_01260 0.27 -2.0 276,744 + AO353_01260 0.55 +0.8 276,744 + AO353_01260 0.55 +0.7 276,744 + AO353_01260 0.55 -0.4 276,744 + AO353_01260 0.55 -0.3 276,745 - AO353_01260 0.55 +0.6 276,745 - AO353_01260 0.55 -0.2 276,745 - AO353_01260 0.55 -2.6 276,745 - AO353_01260 0.55 -1.3 276,745 - AO353_01260 0.55 -0.3 276,745 - AO353_01260 0.55 -0.3 276,745 - AO353_01260 0.55 +0.7 276,816 + AO353_01260 0.64 -1.8 276,816 + AO353_01260 0.64 +0.1 276,817 - AO353_01260 0.64 -0.5 276,895 - AO353_01260 0.74 -0.2 276,978 - AO353_01260 0.85 -0.4 277,099 + -0.8 277,099 + -1.3 277,099 + +0.7 277,099 + -0.2 277,100 - -1.3 277,100 - -1.0 277,100 - +0.2 277,100 - +1.3 277,100 - +0.6 277,139 - -0.3 277,161 + +0.5 277,161 + +0.4 277,161 + +0.5 277,161 + +0.2 277,162 - +0.9 277,162 - +0.2 277,162 - +2.4 277,162 - +0.4 277,162 - -0.8 277,162 - +0.3 277,197 + +0.1 277,197 + -0.3 277,197 + -1.3 277,198 - +0.0 277,198 - +2.2 277,198 - -0.1 277,198 - -0.8 277,198 - -0.4 277,198 - +1.2 277,198 - -1.2 277,352 + AO353_01265 0.30 -1.1 277,352 + AO353_01265 0.30 -1.7 277,353 - AO353_01265 0.31 -0.4 277,353 - AO353_01265 0.31 +0.5 277,476 + AO353_01265 0.50 -0.6 277,477 - AO353_01265 0.50 -1.1 277,477 - AO353_01265 0.50 +0.4 277,477 - AO353_01265 0.50 -0.8 277,477 - AO353_01265 0.50 -1.7 277,477 - AO353_01265 0.50 +0.2 277,477 - AO353_01265 0.50 -0.2 277,477 - AO353_01265 0.50 -1.7 277,648 - AO353_01265 0.77 -0.1 277,698 + AO353_01265 0.85 -0.5 277,698 + AO353_01265 0.85 +0.5 277,699 - AO353_01265 0.86 -0.8 277,699 - AO353_01265 0.86 -1.7 277,800 + +0.7 277,801 - -0.4 277,913 - AO353_01270 0.11 -1.1 278,047 - AO353_01270 0.25 -0.8 278,047 - AO353_01270 0.25 -0.1 278,047 - AO353_01270 0.25 -0.3 278,440 + AO353_01270 0.64 +0.7 278,440 + AO353_01270 0.64 +0.2 278,520 + AO353_01270 0.72 -1.4 278,521 - AO353_01270 0.72 -1.1 278,742 + -1.1 278,742 + -0.1
Or see this region's nucleotide sequence