Experiment: Beta-alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS19655 and ABZR87_RS19660 are separated by 155 nucleotides ABZR87_RS19660 and ABZR87_RS19665 are separated by 1 nucleotides
ABZR87_RS19655: ABZR87_RS19655 - PLP-dependent aminotransferase family protein, at 783,760 to 785,163
_RS19655
ABZR87_RS19660: ABZR87_RS19660 - aspartate aminotransferase family protein, at 785,319 to 786,656
_RS19660
ABZR87_RS19665: ABZR87_RS19665 - CoA-acylating methylmalonate-semialdehyde dehydrogenase, at 786,658 to 788,181
_RS19665
Position (kb) 785
786
787 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 784.346 kb on + strand, within ABZR87_RS19655 at 784.682 kb on + strand, within ABZR87_RS19655 at 784.683 kb on - strand, within ABZR87_RS19655 at 784.924 kb on - strand, within ABZR87_RS19655 at 784.991 kb on + strand, within ABZR87_RS19655 at 784.991 kb on + strand, within ABZR87_RS19655 at 784.992 kb on - strand, within ABZR87_RS19655 at 784.992 kb on - strand, within ABZR87_RS19655 at 785.008 kb on - strand, within ABZR87_RS19655 at 785.008 kb on - strand, within ABZR87_RS19655 at 785.008 kb on - strand, within ABZR87_RS19655 at 785.127 kb on + strand at 785.127 kb on + strand at 785.128 kb on - strand at 785.128 kb on - strand at 785.128 kb on - strand at 785.128 kb on - strand at 785.128 kb on - strand at 785.128 kb on - strand at 785.201 kb on - strand at 785.213 kb on - strand at 785.361 kb on + strand at 785.361 kb on + strand at 785.361 kb on + strand at 785.361 kb on + strand at 785.362 kb on - strand at 785.394 kb on + strand at 785.394 kb on + strand at 785.394 kb on + strand at 785.394 kb on + strand at 785.394 kb on + strand at 785.395 kb on - strand at 785.395 kb on - strand at 785.436 kb on + strand at 785.436 kb on + strand at 785.436 kb on + strand at 785.436 kb on + strand at 785.436 kb on + strand at 785.436 kb on + strand at 785.436 kb on + strand at 785.436 kb on + strand at 785.436 kb on + strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.437 kb on - strand at 785.439 kb on + strand at 785.439 kb on + strand at 785.559 kb on + strand, within ABZR87_RS19660 at 785.559 kb on + strand, within ABZR87_RS19660 at 785.560 kb on - strand, within ABZR87_RS19660 at 785.560 kb on - strand, within ABZR87_RS19660 at 785.707 kb on - strand, within ABZR87_RS19660 at 785.707 kb on - strand, within ABZR87_RS19660 at 785.763 kb on + strand, within ABZR87_RS19660 at 785.864 kb on + strand, within ABZR87_RS19660 at 785.865 kb on - strand, within ABZR87_RS19660 at 785.865 kb on - strand, within ABZR87_RS19660 at 785.865 kb on - strand, within ABZR87_RS19660 at 786.034 kb on - strand, within ABZR87_RS19660 at 786.086 kb on - strand, within ABZR87_RS19660 at 786.285 kb on + strand, within ABZR87_RS19660 at 786.286 kb on - strand, within ABZR87_RS19660 at 786.291 kb on + strand, within ABZR87_RS19660 at 786.291 kb on + strand, within ABZR87_RS19660 at 786.291 kb on + strand, within ABZR87_RS19660 at 786.291 kb on + strand, within ABZR87_RS19660 at 786.291 kb on + strand, within ABZR87_RS19660 at 786.343 kb on - strand, within ABZR87_RS19660 at 786.508 kb on - strand, within ABZR87_RS19660 at 786.508 kb on - strand, within ABZR87_RS19660 at 786.553 kb on - strand at 786.632 kb on + strand at 786.633 kb on - strand at 786.649 kb on + strand at 786.649 kb on + strand at 786.649 kb on + strand at 786.650 kb on - strand at 786.650 kb on - strand at 786.650 kb on - strand at 786.650 kb on - strand at 786.706 kb on + strand at 786.706 kb on + strand at 786.706 kb on + strand at 786.706 kb on + strand at 786.706 kb on + strand at 786.706 kb on + strand at 786.706 kb on + strand at 786.706 kb on + strand at 786.706 kb on + strand at 786.706 kb on + strand at 786.707 kb on - strand at 786.707 kb on - strand at 787.381 kb on + strand, within ABZR87_RS19665 at 787.381 kb on + strand, within ABZR87_RS19665 at 787.381 kb on + strand, within ABZR87_RS19665 at 787.381 kb on + strand, within ABZR87_RS19665 at 787.381 kb on + strand, within ABZR87_RS19665 at 787.382 kb on - strand, within ABZR87_RS19665 at 787.382 kb on - strand, within ABZR87_RS19665 at 787.382 kb on - strand, within ABZR87_RS19665 at 787.382 kb on - strand, within ABZR87_RS19665 at 787.382 kb on - strand, within ABZR87_RS19665 at 787.382 kb on - strand, within ABZR87_RS19665 at 787.382 kb on - strand, within ABZR87_RS19665 at 787.387 kb on + strand, within ABZR87_RS19665 at 787.388 kb on - strand, within ABZR87_RS19665 at 787.507 kb on + strand, within ABZR87_RS19665
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-alanine (C) remove 784,346 + ABZR87_RS19655 0.42 -3.1 784,682 + ABZR87_RS19655 0.66 -3.2 784,683 - ABZR87_RS19655 0.66 -3.5 784,924 - ABZR87_RS19655 0.83 -3.7 784,991 + ABZR87_RS19655 0.88 -3.9 784,991 + ABZR87_RS19655 0.88 -1.9 784,992 - ABZR87_RS19655 0.88 -4.1 784,992 - ABZR87_RS19655 0.88 -0.2 785,008 - ABZR87_RS19655 0.89 -4.6 785,008 - ABZR87_RS19655 0.89 -2.1 785,008 - ABZR87_RS19655 0.89 -2.7 785,127 + -2.7 785,127 + -1.5 785,128 - -3.0 785,128 - -4.2 785,128 - -2.9 785,128 - -3.1 785,128 - -3.9 785,128 - -3.7 785,201 - -3.0 785,213 - -1.3 785,361 + -3.3 785,361 + -3.3 785,361 + -2.2 785,361 + -3.8 785,362 - -2.7 785,394 + -3.4 785,394 + -2.9 785,394 + -2.4 785,394 + -4.7 785,394 + -2.5 785,395 - +0.1 785,395 - -4.2 785,436 + -2.1 785,436 + -2.2 785,436 + -2.2 785,436 + -2.7 785,436 + +1.2 785,436 + -3.9 785,436 + -2.7 785,436 + -2.4 785,436 + -3.7 785,437 - -3.9 785,437 - -3.7 785,437 - -1.7 785,437 - +0.5 785,437 - -3.7 785,437 - -4.0 785,437 - -2.7 785,437 - +1.2 785,437 - -3.7 785,437 - -3.7 785,437 - -2.9 785,437 - -3.9 785,437 - -3.4 785,437 - -1.6 785,437 - -2.1 785,439 + -2.3 785,439 + -3.2 785,559 + ABZR87_RS19660 0.18 -2.9 785,559 + ABZR87_RS19660 0.18 -3.2 785,560 - ABZR87_RS19660 0.18 -0.7 785,560 - ABZR87_RS19660 0.18 -3.1 785,707 - ABZR87_RS19660 0.29 -2.2 785,707 - ABZR87_RS19660 0.29 -1.4 785,763 + ABZR87_RS19660 0.33 -2.2 785,864 + ABZR87_RS19660 0.41 -1.4 785,865 - ABZR87_RS19660 0.41 -4.5 785,865 - ABZR87_RS19660 0.41 +0.6 785,865 - ABZR87_RS19660 0.41 -3.7 786,034 - ABZR87_RS19660 0.53 -3.8 786,086 - ABZR87_RS19660 0.57 -3.7 786,285 + ABZR87_RS19660 0.72 -3.0 786,286 - ABZR87_RS19660 0.72 -2.7 786,291 + ABZR87_RS19660 0.73 -2.9 786,291 + ABZR87_RS19660 0.73 -3.3 786,291 + ABZR87_RS19660 0.73 -2.2 786,291 + ABZR87_RS19660 0.73 -3.5 786,291 + ABZR87_RS19660 0.73 -0.2 786,343 - ABZR87_RS19660 0.77 -3.4 786,508 - ABZR87_RS19660 0.89 -2.0 786,508 - ABZR87_RS19660 0.89 -3.2 786,553 - -1.9 786,632 + -1.7 786,633 - -2.5 786,649 + -3.1 786,649 + -3.2 786,649 + -0.2 786,650 - -2.9 786,650 - -2.8 786,650 - -3.0 786,650 - +0.2 786,706 + -3.2 786,706 + -2.8 786,706 + -4.7 786,706 + -4.3 786,706 + -1.8 786,706 + -3.5 786,706 + -3.5 786,706 + -2.9 786,706 + -2.5 786,706 + -3.0 786,707 - -1.4 786,707 - -3.0 787,381 + ABZR87_RS19665 0.47 -1.9 787,381 + ABZR87_RS19665 0.47 +1.2 787,381 + ABZR87_RS19665 0.47 -2.1 787,381 + ABZR87_RS19665 0.47 -3.2 787,381 + ABZR87_RS19665 0.47 -3.1 787,382 - ABZR87_RS19665 0.48 -2.2 787,382 - ABZR87_RS19665 0.48 -2.2 787,382 - ABZR87_RS19665 0.48 -3.7 787,382 - ABZR87_RS19665 0.48 -2.3 787,382 - ABZR87_RS19665 0.48 -3.7 787,382 - ABZR87_RS19665 0.48 -2.7 787,382 - ABZR87_RS19665 0.48 -3.4 787,387 + ABZR87_RS19665 0.48 -2.8 787,388 - ABZR87_RS19665 0.48 -3.5 787,507 + ABZR87_RS19665 0.56 -3.8
Or see this region's nucleotide sequence