Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS14850

Experiment: Beta-alanine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntABZR87_RS14845 and ABZR87_RS14850 are separated by 8 nucleotidesABZR87_RS14850 and ABZR87_RS14855 are separated by 12 nucleotides ABZR87_RS14845: ABZR87_RS14845 - NADH-quinone oxidoreductase subunit NuoH, at 3,132,638 to 3,133,702 _RS14845 ABZR87_RS14850: ABZR87_RS14850 - NADH-quinone oxidoreductase subunit NuoG, at 3,133,711 to 3,136,062 _RS14850 ABZR87_RS14855: ABZR87_RS14855 - NADH-quinone oxidoreductase subunit NuoF, at 3,136,075 to 3,137,370 _RS14855 Position (kb) 3133 3134 3135 3136 3137Strain fitness (log2 ratio) -1 0 1at 3133.713 kb on - strandat 3133.713 kb on - strandat 3133.713 kb on - strandat 3133.713 kb on - strandat 3133.713 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Beta-alanine (C)
remove
3,133,713 - +0.9
3,133,713 - -0.5
3,133,713 - +0.1
3,133,713 - -0.4
3,133,713 - +0.0

Or see this region's nucleotide sequence