Experiment: Beta-alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01340 and ABZR87_RS01345 are separated by 82 nucleotides ABZR87_RS01345 and ABZR87_RS01350 are separated by 68 nucleotides ABZR87_RS01350 and ABZR87_RS01355 overlap by 4 nucleotides
ABZR87_RS01340: ABZR87_RS01340 - Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha, at 279,556 to 280,695
_RS01340
ABZR87_RS01345: ABZR87_RS01345 - aspartate 1-decarboxylase, at 280,778 to 281,140
_RS01345
ABZR87_RS01350: ABZR87_RS01350 - NAD(P) transhydrogenase subunit alpha, at 281,209 to 281,538
_RS01350
ABZR87_RS01355: ABZR87_RS01355 - NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta, at 281,535 to 282,995
_RS01355
Position (kb) 281
282 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 280.243 kb on + strand, within ABZR87_RS01340 at 280.498 kb on + strand, within ABZR87_RS01340 at 280.499 kb on - strand, within ABZR87_RS01340 at 280.543 kb on + strand, within ABZR87_RS01340 at 280.543 kb on + strand, within ABZR87_RS01340 at 280.551 kb on + strand, within ABZR87_RS01340 at 280.693 kb on + strand at 280.950 kb on - strand, within ABZR87_RS01345 at 281.263 kb on + strand, within ABZR87_RS01350 at 281.263 kb on + strand, within ABZR87_RS01350 at 281.263 kb on + strand, within ABZR87_RS01350 at 281.264 kb on - strand, within ABZR87_RS01350 at 281.264 kb on - strand, within ABZR87_RS01350 at 281.264 kb on - strand, within ABZR87_RS01350 at 281.264 kb on - strand, within ABZR87_RS01350 at 281.264 kb on - strand, within ABZR87_RS01350 at 281.272 kb on + strand, within ABZR87_RS01350 at 281.272 kb on + strand, within ABZR87_RS01350 at 281.272 kb on + strand, within ABZR87_RS01350 at 281.307 kb on + strand, within ABZR87_RS01350 at 281.307 kb on + strand, within ABZR87_RS01350 at 281.307 kb on + strand, within ABZR87_RS01350 at 281.308 kb on - strand, within ABZR87_RS01350 at 281.308 kb on - strand, within ABZR87_RS01350 at 281.308 kb on - strand, within ABZR87_RS01350 at 281.562 kb on + strand at 281.562 kb on + strand at 281.562 kb on + strand at 281.562 kb on + strand at 281.562 kb on + strand at 281.562 kb on + strand at 281.563 kb on - strand at 281.563 kb on - strand at 281.563 kb on - strand at 281.563 kb on - strand at 281.691 kb on + strand, within ABZR87_RS01355 at 281.691 kb on + strand, within ABZR87_RS01355 at 281.691 kb on + strand, within ABZR87_RS01355 at 281.691 kb on + strand, within ABZR87_RS01355 at 281.691 kb on + strand, within ABZR87_RS01355 at 281.692 kb on - strand, within ABZR87_RS01355 at 281.692 kb on - strand, within ABZR87_RS01355 at 281.692 kb on - strand, within ABZR87_RS01355 at 281.692 kb on - strand, within ABZR87_RS01355 at 281.692 kb on - strand, within ABZR87_RS01355 at 281.692 kb on - strand, within ABZR87_RS01355 at 281.692 kb on - strand, within ABZR87_RS01355 at 281.692 kb on - strand, within ABZR87_RS01355 at 281.692 kb on - strand, within ABZR87_RS01355 at 281.793 kb on + strand, within ABZR87_RS01355 at 281.794 kb on - strand, within ABZR87_RS01355 at 281.876 kb on + strand, within ABZR87_RS01355 at 281.876 kb on + strand, within ABZR87_RS01355 at 281.876 kb on + strand, within ABZR87_RS01355 at 281.876 kb on + strand, within ABZR87_RS01355 at 281.876 kb on + strand, within ABZR87_RS01355 at 281.877 kb on - strand, within ABZR87_RS01355 at 281.877 kb on - strand, within ABZR87_RS01355 at 282.028 kb on + strand, within ABZR87_RS01355 at 282.029 kb on - strand, within ABZR87_RS01355 at 282.039 kb on + strand, within ABZR87_RS01355 at 282.039 kb on + strand, within ABZR87_RS01355 at 282.040 kb on - strand, within ABZR87_RS01355 at 282.040 kb on - strand, within ABZR87_RS01355 at 282.040 kb on - strand, within ABZR87_RS01355 at 282.040 kb on - strand, within ABZR87_RS01355 at 282.202 kb on + strand, within ABZR87_RS01355 at 282.203 kb on - strand, within ABZR87_RS01355 at 282.203 kb on - strand, within ABZR87_RS01355 at 282.264 kb on + strand, within ABZR87_RS01355 at 282.264 kb on + strand, within ABZR87_RS01355 at 282.265 kb on - strand, within ABZR87_RS01355 at 282.363 kb on + strand, within ABZR87_RS01355 at 282.363 kb on + strand, within ABZR87_RS01355 at 282.363 kb on + strand, within ABZR87_RS01355 at 282.363 kb on + strand, within ABZR87_RS01355 at 282.363 kb on + strand, within ABZR87_RS01355 at 282.364 kb on - strand, within ABZR87_RS01355 at 282.364 kb on - strand, within ABZR87_RS01355 at 282.364 kb on - strand, within ABZR87_RS01355 at 282.364 kb on - strand, within ABZR87_RS01355
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-alanine (C) remove 280,243 + ABZR87_RS01340 0.60 -1.4 280,498 + ABZR87_RS01340 0.83 -1.1 280,499 - ABZR87_RS01340 0.83 +0.2 280,543 + ABZR87_RS01340 0.87 -1.0 280,543 + ABZR87_RS01340 0.87 +1.0 280,551 + ABZR87_RS01340 0.87 +0.1 280,693 + -0.7 280,950 - ABZR87_RS01345 0.47 +1.2 281,263 + ABZR87_RS01350 0.16 -1.5 281,263 + ABZR87_RS01350 0.16 -0.7 281,263 + ABZR87_RS01350 0.16 -0.1 281,264 - ABZR87_RS01350 0.17 -2.2 281,264 - ABZR87_RS01350 0.17 -1.6 281,264 - ABZR87_RS01350 0.17 -1.1 281,264 - ABZR87_RS01350 0.17 -1.7 281,264 - ABZR87_RS01350 0.17 -1.6 281,272 + ABZR87_RS01350 0.19 +0.0 281,272 + ABZR87_RS01350 0.19 -1.5 281,272 + ABZR87_RS01350 0.19 -1.2 281,307 + ABZR87_RS01350 0.30 -1.2 281,307 + ABZR87_RS01350 0.30 -1.2 281,307 + ABZR87_RS01350 0.30 -0.9 281,308 - ABZR87_RS01350 0.30 -1.2 281,308 - ABZR87_RS01350 0.30 -0.2 281,308 - ABZR87_RS01350 0.30 -1.6 281,562 + -2.2 281,562 + -0.6 281,562 + -0.8 281,562 + -0.1 281,562 + -0.8 281,562 + -1.9 281,563 - +0.5 281,563 - -1.3 281,563 - -1.7 281,563 - -1.5 281,691 + ABZR87_RS01355 0.11 -1.0 281,691 + ABZR87_RS01355 0.11 -0.2 281,691 + ABZR87_RS01355 0.11 -0.5 281,691 + ABZR87_RS01355 0.11 +0.0 281,691 + ABZR87_RS01355 0.11 -0.1 281,692 - ABZR87_RS01355 0.11 -0.5 281,692 - ABZR87_RS01355 0.11 -0.9 281,692 - ABZR87_RS01355 0.11 -3.6 281,692 - ABZR87_RS01355 0.11 -1.8 281,692 - ABZR87_RS01355 0.11 -2.5 281,692 - ABZR87_RS01355 0.11 -0.3 281,692 - ABZR87_RS01355 0.11 -1.1 281,692 - ABZR87_RS01355 0.11 -0.7 281,692 - ABZR87_RS01355 0.11 -1.7 281,793 + ABZR87_RS01355 0.18 -0.5 281,794 - ABZR87_RS01355 0.18 -1.6 281,876 + ABZR87_RS01355 0.23 +0.6 281,876 + ABZR87_RS01355 0.23 -1.8 281,876 + ABZR87_RS01355 0.23 -0.3 281,876 + ABZR87_RS01355 0.23 -1.8 281,876 + ABZR87_RS01355 0.23 -0.1 281,877 - ABZR87_RS01355 0.23 -1.7 281,877 - ABZR87_RS01355 0.23 -0.8 282,028 + ABZR87_RS01355 0.34 -1.8 282,029 - ABZR87_RS01355 0.34 -1.1 282,039 + ABZR87_RS01355 0.34 -0.7 282,039 + ABZR87_RS01355 0.34 -1.2 282,040 - ABZR87_RS01355 0.35 -0.4 282,040 - ABZR87_RS01355 0.35 -0.4 282,040 - ABZR87_RS01355 0.35 -1.8 282,040 - ABZR87_RS01355 0.35 -0.5 282,202 + ABZR87_RS01355 0.46 -1.1 282,203 - ABZR87_RS01355 0.46 -0.8 282,203 - ABZR87_RS01355 0.46 -1.2 282,264 + ABZR87_RS01355 0.50 -1.9 282,264 + ABZR87_RS01355 0.50 +0.6 282,265 - ABZR87_RS01355 0.50 -1.0 282,363 + ABZR87_RS01355 0.57 -0.6 282,363 + ABZR87_RS01355 0.57 -1.3 282,363 + ABZR87_RS01355 0.57 -1.6 282,363 + ABZR87_RS01355 0.57 -0.3 282,363 + ABZR87_RS01355 0.57 -0.6 282,364 - ABZR87_RS01355 0.57 -1.2 282,364 - ABZR87_RS01355 0.57 -0.7 282,364 - ABZR87_RS01355 0.57 -1.1 282,364 - ABZR87_RS01355 0.57 -1.3
Or see this region's nucleotide sequence