Experiment: Beta-alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS00275 and ABZR87_RS00280 are separated by 79 nucleotides ABZR87_RS00280 and ABZR87_RS00285 are separated by 271 nucleotides
ABZR87_RS00275: ABZR87_RS00275 - NAD-dependent epimerase/dehydratase family protein, at 55,994 to 56,995
_RS00275
ABZR87_RS00280: ABZR87_RS00280 - CDP-6-deoxy-delta-3,4-glucoseen reductase, at 57,075 to 58,124
_RS00280
ABZR87_RS00285: ABZR87_RS00285 - acetylornithine transaminase, at 58,396 to 59,583
_RS00285
Position (kb) 57
58
59 Strain fitness (log2 ratio) -2
-1
0
1
2 at 56.193 kb on + strand, within ABZR87_RS00275 at 56.310 kb on + strand, within ABZR87_RS00275 at 56.310 kb on + strand, within ABZR87_RS00275 at 56.311 kb on - strand, within ABZR87_RS00275 at 56.311 kb on - strand, within ABZR87_RS00275 at 56.311 kb on - strand, within ABZR87_RS00275 at 56.382 kb on + strand, within ABZR87_RS00275 at 56.382 kb on + strand, within ABZR87_RS00275 at 56.382 kb on + strand, within ABZR87_RS00275 at 56.383 kb on - strand, within ABZR87_RS00275 at 56.383 kb on - strand, within ABZR87_RS00275 at 56.383 kb on - strand, within ABZR87_RS00275 at 56.383 kb on - strand, within ABZR87_RS00275 at 56.510 kb on + strand, within ABZR87_RS00275 at 56.535 kb on + strand, within ABZR87_RS00275 at 56.535 kb on + strand, within ABZR87_RS00275 at 56.535 kb on + strand, within ABZR87_RS00275 at 56.535 kb on + strand, within ABZR87_RS00275 at 56.536 kb on - strand, within ABZR87_RS00275 at 56.536 kb on - strand, within ABZR87_RS00275 at 56.556 kb on + strand, within ABZR87_RS00275 at 56.556 kb on + strand, within ABZR87_RS00275 at 56.556 kb on + strand, within ABZR87_RS00275 at 56.557 kb on - strand, within ABZR87_RS00275 at 56.680 kb on + strand, within ABZR87_RS00275 at 56.681 kb on - strand, within ABZR87_RS00275 at 56.681 kb on - strand, within ABZR87_RS00275 at 56.681 kb on - strand, within ABZR87_RS00275 at 56.681 kb on - strand, within ABZR87_RS00275 at 57.061 kb on + strand at 57.062 kb on - strand at 57.062 kb on - strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.073 kb on - strand at 57.073 kb on - strand at 57.073 kb on - strand at 57.073 kb on - strand at 57.073 kb on - strand at 57.081 kb on + strand at 57.081 kb on + strand at 57.178 kb on - strand at 57.462 kb on - strand, within ABZR87_RS00280 at 57.462 kb on - strand, within ABZR87_RS00280 at 57.462 kb on - strand, within ABZR87_RS00280 at 57.462 kb on - strand, within ABZR87_RS00280 at 57.483 kb on + strand, within ABZR87_RS00280 at 57.483 kb on + strand, within ABZR87_RS00280 at 57.484 kb on - strand, within ABZR87_RS00280 at 57.522 kb on + strand, within ABZR87_RS00280 at 57.522 kb on + strand, within ABZR87_RS00280 at 57.522 kb on + strand, within ABZR87_RS00280 at 57.523 kb on - strand, within ABZR87_RS00280 at 57.523 kb on - strand, within ABZR87_RS00280 at 57.596 kb on + strand, within ABZR87_RS00280 at 57.603 kb on + strand, within ABZR87_RS00280 at 57.603 kb on + strand, within ABZR87_RS00280 at 57.604 kb on - strand, within ABZR87_RS00280 at 57.804 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.886 kb on - strand, within ABZR87_RS00280 at 57.886 kb on - strand, within ABZR87_RS00280 at 57.886 kb on - strand, within ABZR87_RS00280 at 57.970 kb on - strand, within ABZR87_RS00280 at 57.997 kb on - strand, within ABZR87_RS00280 at 58.184 kb on - strand at 58.184 kb on - strand at 58.184 kb on - strand at 58.196 kb on + strand at 58.197 kb on - strand at 58.197 kb on - strand at 58.274 kb on + strand at 58.412 kb on - strand at 58.432 kb on + strand at 58.432 kb on + strand at 58.432 kb on + strand at 58.432 kb on + strand at 58.432 kb on + strand at 58.432 kb on + strand at 58.433 kb on - strand at 58.433 kb on - strand at 58.433 kb on - strand at 58.433 kb on - strand at 58.433 kb on - strand at 58.756 kb on - strand, within ABZR87_RS00285 at 58.756 kb on - strand, within ABZR87_RS00285 at 58.756 kb on - strand, within ABZR87_RS00285
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-alanine (C) remove 56,193 + ABZR87_RS00275 0.20 +0.1 56,310 + ABZR87_RS00275 0.32 +0.7 56,310 + ABZR87_RS00275 0.32 -0.8 56,311 - ABZR87_RS00275 0.32 -0.0 56,311 - ABZR87_RS00275 0.32 -0.4 56,311 - ABZR87_RS00275 0.32 -0.2 56,382 + ABZR87_RS00275 0.39 -1.6 56,382 + ABZR87_RS00275 0.39 +0.6 56,382 + ABZR87_RS00275 0.39 -1.0 56,383 - ABZR87_RS00275 0.39 -0.4 56,383 - ABZR87_RS00275 0.39 +0.5 56,383 - ABZR87_RS00275 0.39 -0.1 56,383 - ABZR87_RS00275 0.39 +0.1 56,510 + ABZR87_RS00275 0.51 -0.3 56,535 + ABZR87_RS00275 0.54 +0.0 56,535 + ABZR87_RS00275 0.54 +1.9 56,535 + ABZR87_RS00275 0.54 -0.2 56,535 + ABZR87_RS00275 0.54 -0.9 56,536 - ABZR87_RS00275 0.54 -1.4 56,536 - ABZR87_RS00275 0.54 +0.5 56,556 + ABZR87_RS00275 0.56 +0.0 56,556 + ABZR87_RS00275 0.56 -0.0 56,556 + ABZR87_RS00275 0.56 -0.5 56,557 - ABZR87_RS00275 0.56 +0.2 56,680 + ABZR87_RS00275 0.68 +0.3 56,681 - ABZR87_RS00275 0.69 +0.6 56,681 - ABZR87_RS00275 0.69 -0.2 56,681 - ABZR87_RS00275 0.69 -0.8 56,681 - ABZR87_RS00275 0.69 +0.2 57,061 + -0.8 57,062 - -0.1 57,062 - +0.9 57,072 + +0.1 57,072 + +0.2 57,072 + +0.5 57,072 + -0.1 57,072 + -0.2 57,072 + -0.3 57,072 + -0.4 57,072 + -0.4 57,073 - -0.1 57,073 - -0.6 57,073 - +1.0 57,073 - +0.0 57,073 - +0.6 57,081 + -0.6 57,081 + +0.7 57,178 - +0.7 57,462 - ABZR87_RS00280 0.37 -0.3 57,462 - ABZR87_RS00280 0.37 +0.2 57,462 - ABZR87_RS00280 0.37 -0.0 57,462 - ABZR87_RS00280 0.37 +0.4 57,483 + ABZR87_RS00280 0.39 +0.2 57,483 + ABZR87_RS00280 0.39 +0.0 57,484 - ABZR87_RS00280 0.39 +0.4 57,522 + ABZR87_RS00280 0.43 +0.4 57,522 + ABZR87_RS00280 0.43 +1.0 57,522 + ABZR87_RS00280 0.43 -0.1 57,523 - ABZR87_RS00280 0.43 -0.4 57,523 - ABZR87_RS00280 0.43 -0.1 57,596 + ABZR87_RS00280 0.50 -0.1 57,603 + ABZR87_RS00280 0.50 +0.2 57,603 + ABZR87_RS00280 0.50 -0.7 57,604 - ABZR87_RS00280 0.50 +0.1 57,804 + ABZR87_RS00280 0.69 -0.2 57,834 + ABZR87_RS00280 0.72 -0.4 57,834 + ABZR87_RS00280 0.72 -0.2 57,834 + ABZR87_RS00280 0.72 -0.8 57,834 + ABZR87_RS00280 0.72 +0.3 57,834 + ABZR87_RS00280 0.72 -0.3 57,834 + ABZR87_RS00280 0.72 +0.1 57,834 + ABZR87_RS00280 0.72 -0.1 57,834 + ABZR87_RS00280 0.72 +0.3 57,834 + ABZR87_RS00280 0.72 -0.4 57,834 + ABZR87_RS00280 0.72 +0.3 57,834 + ABZR87_RS00280 0.72 -0.5 57,835 - ABZR87_RS00280 0.72 +0.1 57,835 - ABZR87_RS00280 0.72 -1.2 57,835 - ABZR87_RS00280 0.72 +0.4 57,835 - ABZR87_RS00280 0.72 -0.0 57,835 - ABZR87_RS00280 0.72 -0.1 57,835 - ABZR87_RS00280 0.72 -0.0 57,886 - ABZR87_RS00280 0.77 +0.4 57,886 - ABZR87_RS00280 0.77 -0.3 57,886 - ABZR87_RS00280 0.77 +0.2 57,970 - ABZR87_RS00280 0.85 -1.6 57,997 - ABZR87_RS00280 0.88 -0.3 58,184 - +0.5 58,184 - +0.0 58,184 - +0.2 58,196 + +0.1 58,197 - -0.3 58,197 - +0.7 58,274 + -1.2 58,412 - +0.3 58,432 + -2.5 58,432 + -0.9 58,432 + -1.1 58,432 + -1.4 58,432 + -2.4 58,432 + -1.4 58,433 - +2.5 58,433 - -1.0 58,433 - +0.9 58,433 - -0.7 58,433 - -1.7 58,756 - ABZR87_RS00285 0.30 +2.5 58,756 - ABZR87_RS00285 0.30 +0.5 58,756 - ABZR87_RS00285 0.30 -0.2
Or see this region's nucleotide sequence