Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2698

Experiment: carbon source anaerobic Succinic Acid 31.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRru_A2696 and Rru_A2697 are separated by 58 nucleotidesRru_A2697 and Rru_A2698 are separated by 370 nucleotidesRru_A2698 and Rru_A2699 are separated by 4 nucleotidesRru_A2699 and Rru_A2700 are separated by 151 nucleotides Rru_A2696: Rru_A2696 - Ribosomal protein L7/L12 (NCBI), at 3,121,696 to 3,122,067 _A2696 Rru_A2697: Rru_A2697 - Ribosomal protein L10 (NCBI), at 3,122,126 to 3,122,644 _A2697 Rru_A2698: Rru_A2698 - Ribosomal protein L1 (NCBI), at 3,123,015 to 3,123,716 _A2698 Rru_A2699: Rru_A2699 - Ribosomal protein L11 (NCBI), at 3,123,721 to 3,124,149 _A2699 Rru_A2700: Rru_A2700 - NusG antitermination factor (NCBI), at 3,124,301 to 3,124,831 _A2700 Position (kb) 3123 3124Strain fitness (log2 ratio) -2 -1 0 1at 3124.173 kb on - strandat 3124.195 kb on - strandat 3124.195 kb on - strandat 3124.195 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction carbon source anaerobic Succinic Acid 31.25 mM
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3,124,173 - +0.8
3,124,195 - +0.6
3,124,195 - +1.3
3,124,195 - -1.9

Or see this region's nucleotide sequence