Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2694

Experiment: carbon source anaerobic Succinic Acid 31.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRru_A2692 and Rru_A2693 are separated by 15 nucleotidesRru_A2693 and Rru_A2694 are separated by 413 nucleotidesRru_A2694 and Rru_A2695 are separated by 148 nucleotides Rru_A2692: Rru_A2692 - Ribosomal protein S7 (NCBI), at 3,111,709 to 3,112,179 _A2692 Rru_A2693: Rru_A2693 - Ribosomal protein S12 (NCBI), at 3,112,195 to 3,112,566 _A2693 Rru_A2694: Rru_A2694 - DNA-directed RNA polymerase (NCBI), at 3,112,980 to 3,117,161 _A2694 Rru_A2695: Rru_A2695 - DNA-directed RNA polymerase, beta subunit (NCBI), at 3,117,310 to 3,121,491 _A2695 Position (kb) 3112 3113 3114 3115 3116 3117 3118Strain fitness (log2 ratio) -1 0 1at 3112.879 kb on - strandat 3117.308 kb on - strandat 3117.312 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction carbon source anaerobic Succinic Acid 31.25 mM
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3,112,879 - -0.2
3,117,308 - -1.5
3,117,312 - +0.8

Or see this region's nucleotide sequence