Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2689

Experiment: carbon source anaerobic Succinic Acid 31.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRru_A2687 and Rru_A2688 are separated by 6 nucleotidesRru_A2688 and Rru_A2689 are separated by 27 nucleotidesRru_A2689 and Rru_A2690 are separated by 95 nucleotides Rru_A2687: Rru_A2687 - Ribosomal protein L4/L1e (NCBI), at 3,106,607 to 3,107,227 _A2687 Rru_A2688: Rru_A2688 - Ribosomal protein L3 (NCBI), at 3,107,234 to 3,107,941 _A2688 Rru_A2689: Rru_A2689 - Ribosomal protein S10 (NCBI), at 3,107,969 to 3,108,277 _A2689 Rru_A2690: Rru_A2690 - Translation elongation factor Tu (NCBI), at 3,108,373 to 3,109,563 _A2690 Position (kb) 3107 3108 3109Strain fitness (log2 ratio) -2 -1 0 1at 3108.320 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction carbon source anaerobic Succinic Acid 31.25 mM
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3,108,320 - -1.9

Or see this region's nucleotide sequence