Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2161

Experiment: carbon source anaerobic Succinic Acid 31.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source anaerobic Succinic Acid 31.25 mM
2,509,473	-				+1.0
2,509,473	-				+0.2
2,509,473	-				-2.5
2,509,473	-				+0.2
2,509,473	-				-0.9
2,509,473	-				-0.8
2,509,473	-				-2.7
2,509,473	-				+0.2
2,509,500	+				+0.2
2,509,568	+				-4.7
2,509,568	+				+0.8
2,509,568	+				-2.2
2,509,568	+				-2.2
2,509,568	+				-3.5
2,509,569	-				-4.0
2,509,569	-				-3.6
2,509,572	+				-2.3
2,509,573	-				-0.5
2,509,573	-				-3.3
2,509,573	-				-3.6
2,509,634	+				-2.8
2,509,635	-				-1.0
2,509,773	+		Rru_A2161	0.13	-1.0
2,509,773	+		Rru_A2161	0.13	-2.7
2,509,773	+		Rru_A2161	0.13	-1.7
2,509,773	+		Rru_A2161	0.13	-3.3
2,509,773	+		Rru_A2161	0.13	+0.8
2,509,774	-		Rru_A2161	0.13	-3.3
2,509,775	+		Rru_A2161	0.13	-0.8
2,509,775	+		Rru_A2161	0.13	-0.5
2,509,775	+		Rru_A2161	0.13	-3.9
2,509,775	+		Rru_A2161	0.13	-4.1
2,509,776	-		Rru_A2161	0.13	-0.8
2,509,776	-		Rru_A2161	0.13	+1.8
2,509,776	-		Rru_A2161	0.13	-3.5
2,509,776	-		Rru_A2161	0.13	-3.5
2,509,776	-		Rru_A2161	0.13	-3.2
2,509,776	-		Rru_A2161	0.13	+0.2
2,509,776	-		Rru_A2161	0.13	-2.0
2,509,776	-		Rru_A2161	0.13	+0.8
2,509,776	-		Rru_A2161	0.13	-0.5
2,510,073	-		Rru_A2161	0.27	-3.3
2,510,130	-		Rru_A2161	0.29	-0.2
2,510,141	+		Rru_A2161	0.30	-4.8
2,510,141	+		Rru_A2161	0.30	+1.8
2,510,141	+		Rru_A2161	0.30	-2.7
2,510,142	-		Rru_A2161	0.30	-2.0
2,510,142	-		Rru_A2161	0.30	-1.7
2,510,142	-		Rru_A2161	0.30	-3.1
2,510,142	-		Rru_A2161	0.30	-2.5
2,510,142	-		Rru_A2161	0.30	-1.9
2,510,142	-		Rru_A2161	0.30	-3.2
2,510,206	-		Rru_A2161	0.32	-2.0
2,510,207	+		Rru_A2161	0.32	-2.1
2,510,207	+		Rru_A2161	0.32	-1.0
2,510,207	+		Rru_A2161	0.32	-3.1
2,510,208	-		Rru_A2161	0.33	-1.3
2,510,208	-		Rru_A2161	0.33	-3.3
2,510,208	-		Rru_A2161	0.33	-3.4
2,510,231	+		Rru_A2161	0.34	-1.2
2,510,231	+		Rru_A2161	0.34	-3.1
2,510,231	+		Rru_A2161	0.34	-0.7
2,510,231	+		Rru_A2161	0.34	-3.9
2,510,231	+		Rru_A2161	0.34	-3.1
2,510,232	-		Rru_A2161	0.34	-1.5
2,510,232	-		Rru_A2161	0.34	-2.8
2,510,232	-		Rru_A2161	0.34	-3.4
2,510,255	+		Rru_A2161	0.35	-1.0
2,510,255	+		Rru_A2161	0.35	-0.9
2,510,255	+		Rru_A2161	0.35	-1.4
2,510,255	+		Rru_A2161	0.35	+0.2
2,510,255	+		Rru_A2161	0.35	-4.1
2,510,255	+		Rru_A2161	0.35	-4.0
2,510,255	+		Rru_A2161	0.35	-2.4
2,510,255	+		Rru_A2161	0.35	-4.2
2,510,255	+		Rru_A2161	0.35	-1.4
2,510,255	+		Rru_A2161	0.35	-3.7
2,510,256	-		Rru_A2161	0.35	-1.5
2,510,256	-		Rru_A2161	0.35	+2.2
2,510,256	-		Rru_A2161	0.35	-3.1
2,510,256	-		Rru_A2161	0.35	-2.9
2,510,256	-		Rru_A2161	0.35	-3.4
2,510,256	-		Rru_A2161	0.35	-2.9
2,510,256	-		Rru_A2161	0.35	-2.6
2,510,333	+		Rru_A2161	0.38	-3.7
2,510,333	+		Rru_A2161	0.38	-3.4
2,510,379	+		Rru_A2161	0.40	-0.8
2,510,478	+		Rru_A2161	0.44	-1.2
2,510,478	+		Rru_A2161	0.44	-1.5
2,510,478	+		Rru_A2161	0.44	-3.2
2,510,574	-		Rru_A2161	0.49	-1.9
2,510,661	+		Rru_A2161	0.53	-1.6
2,510,663	+		Rru_A2161	0.53	-0.3
2,510,748	+		Rru_A2161	0.56	-2.1
2,510,749	-		Rru_A2161	0.56	-3.6
2,510,749	-		Rru_A2161	0.56	-0.2
2,510,749	-		Rru_A2161	0.56	-1.3
2,510,749	-		Rru_A2161	0.56	-4.8
2,510,749	-		Rru_A2161	0.56	-2.4
2,510,805	+		Rru_A2161	0.59	-3.0
2,510,805	+		Rru_A2161	0.59	-3.5
2,510,805	+		Rru_A2161	0.59	-1.0
2,510,806	-		Rru_A2161	0.59	-2.9
2,510,806	-		Rru_A2161	0.59	-2.8
2,510,806	-		Rru_A2161	0.59	-2.4
2,510,806	-		Rru_A2161	0.59	-2.7
2,511,006	+		Rru_A2161	0.68	-2.2
2,511,006	+		Rru_A2161	0.68	-2.6
2,511,006	+		Rru_A2161	0.68	-1.5
2,511,006	+		Rru_A2161	0.68	-1.8
2,511,007	-		Rru_A2161	0.68	-2.9
2,511,007	-		Rru_A2161	0.68	-0.3
2,511,007	-		Rru_A2161	0.68	-3.5
2,511,009	-		Rru_A2161	0.68	-1.6
2,511,215	+		Rru_A2161	0.77	-1.8
2,511,215	+		Rru_A2161	0.77	+0.8
2,511,215	+		Rru_A2161	0.77	-1.4
2,511,215	+		Rru_A2161	0.77	-0.3
2,511,215	+		Rru_A2161	0.77	-4.7
2,511,216	-		Rru_A2161	0.77	-3.7
2,511,216	-		Rru_A2161	0.77	-2.5
2,511,216	-		Rru_A2161	0.77	+1.8
2,511,216	-		Rru_A2161	0.77	-3.7
2,511,216	-		Rru_A2161	0.77	-2.6
2,511,216	-		Rru_A2161	0.77	-3.6
2,511,216	-		Rru_A2161	0.77	-1.4
2,511,219	+		Rru_A2161	0.77	-4.5
2,511,219	+		Rru_A2161	0.77	-1.8
2,511,447	+		Rru_A2161	0.87	+1.8
2,511,447	+		Rru_A2161	0.87	+0.2
2,511,448	-		Rru_A2161	0.87	-1.9
2,511,448	-		Rru_A2161	0.87	-2.2
2,511,449	+		Rru_A2161	0.87	-1.4
2,511,449	+		Rru_A2161	0.87	+1.8
2,511,449	+		Rru_A2161	0.87	-2.5
2,511,449	+		Rru_A2161	0.87	-3.3
2,511,449	+		Rru_A2161	0.87	-1.5
2,511,449	+		Rru_A2161	0.87	-1.3
2,511,449	+		Rru_A2161	0.87	-2.8
2,511,449	+		Rru_A2161	0.87	-1.6
2,511,449	+		Rru_A2161	0.87	-4.9
2,511,450	-		Rru_A2161	0.87	-1.8
2,511,450	-		Rru_A2161	0.87	-2.9
2,511,450	-		Rru_A2161	0.87	-3.0
2,511,450	-		Rru_A2161	0.87	-2.0
2,511,450	-		Rru_A2161	0.87	+0.8
2,511,450	-		Rru_A2161	0.87	+0.2
2,511,450	-		Rru_A2161	0.87	-1.8
2,511,450	-		Rru_A2161	0.87	-1.2
2,511,817	+				-2.1
2,511,817	+				+0.8
2,511,817	+				-0.8
2,511,818	-				+1.6
2,511,818	-				-1.8
2,511,818	-				-3.0
2,511,873	+				+1.8
2,511,873	+				-4.7
2,511,873	+				-2.6
2,511,873	+				-1.8
2,511,874	-				+2.4
2,511,874	-				-0.8
2,511,874	-				+1.5
2,511,877	+				-3.5
2,511,877	+				-0.5
2,511,877	+				-4.0
2,511,877	+				-2.4
2,511,878	-				+1.1
2,512,088	+		Rru_A2162	0.41	+1.6
2,512,089	-		Rru_A2162	0.41	+3.6
2,512,106	+		Rru_A2162	0.44	-0.5
2,512,121	+		Rru_A2162	0.47	+1.1
2,512,121	+		Rru_A2162	0.47	+1.0
2,512,121	+		Rru_A2162	0.47	+1.1
2,512,121	+		Rru_A2162	0.47	+0.9
2,512,122	-		Rru_A2162	0.48	+1.5
2,512,122	-		Rru_A2162	0.48	+2.2
2,512,122	-		Rru_A2162	0.48	+2.2
2,512,122	-		Rru_A2162	0.48	+2.8
2,512,388	+				-2.2
2,512,389	-				-2.6
2,512,404	-				-2.5