Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0946

Experiment: carbon source anaerobic Succinic Acid 31.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRru_A0945 and Rru_A0946 overlap by 8 nucleotidesRru_A0946 and Rru_A0947 overlap by 13 nucleotidesRru_A0947 and Rru_A0948 overlap by 4 nucleotides Rru_A0945: Rru_A0945 - Cell division protein FtsA (NCBI), at 1,127,986 to 1,129,308 _A0945 Rru_A0946: Rru_A0946 - Cell division protein FtsQ (NCBI), at 1,129,301 to 1,130,296 _A0946 Rru_A0947: Rru_A0947 - D-alanine--D-alanine ligase (NCBI), at 1,130,284 to 1,131,192 _A0947 Rru_A0948: Rru_A0948 - UDP-N-acetylenolpyruvoylglucosamine reductase (NCBI), at 1,131,189 to 1,132,148 _A0948 Position (kb) 1129 1130 1131Strain fitness (log2 ratio) -1 0 1at 1129.332 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction carbon source anaerobic Succinic Acid 31.25 mM
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1,129,332 - +1.7

Or see this region's nucleotide sequence