Experiment: carbon source anaerobic Succinic Acid 31.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rru_A0702 and Rru_A0703 are separated by 3 nucleotides Rru_A0703 and Rru_A0704 are separated by 72 nucleotides Rru_A0704 and Rru_A0705 are separated by 191 nucleotides Rru_A0705 and Rru_A0706 are separated by 85 nucleotides
Rru_A0702: Rru_A0702 - Molybdate ABC transporter, ATP-binding protein (NCBI), at 830,881 to 831,993
_A0702
Rru_A0703: Rru_A0703 - Molybdate ABC transporter, permease protein (NCBI), at 831,997 to 832,689
_A0703
Rru_A0704: Rru_A0704 - Molybdenum ABC transporter, periplasmic binding protein (NCBI), at 832,762 to 833,538
_A0704
Rru_A0705: Rru_A0705 - Glutaredoxin-related protein (NCBI), at 833,730 to 834,059
_A0705
Rru_A0706: Rru_A0706 - RarD protein (NCBI), at 834,145 to 835,077
_A0706
Position (kb) 832
833
834 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 831.984 kb on + strand at 831.984 kb on + strand at 831.985 kb on - strand at 831.998 kb on + strand at 832.128 kb on + strand, within Rru_A0703 at 832.129 kb on - strand, within Rru_A0703 at 832.131 kb on - strand, within Rru_A0703 at 832.167 kb on + strand, within Rru_A0703 at 832.445 kb on + strand, within Rru_A0703 at 832.446 kb on - strand, within Rru_A0703 at 832.529 kb on - strand, within Rru_A0703 at 832.754 kb on + strand at 832.784 kb on + strand at 832.880 kb on + strand, within Rru_A0704 at 832.881 kb on - strand, within Rru_A0704 at 832.881 kb on - strand, within Rru_A0704 at 832.881 kb on - strand, within Rru_A0704 at 832.958 kb on + strand, within Rru_A0704 at 832.959 kb on - strand, within Rru_A0704 at 833.084 kb on + strand, within Rru_A0704 at 833.085 kb on - strand, within Rru_A0704 at 833.085 kb on - strand, within Rru_A0704 at 833.273 kb on + strand, within Rru_A0704 at 833.274 kb on - strand, within Rru_A0704 at 833.274 kb on - strand, within Rru_A0704 at 833.274 kb on - strand, within Rru_A0704 at 833.274 kb on - strand, within Rru_A0704 at 833.274 kb on - strand, within Rru_A0704 at 833.274 kb on - strand, within Rru_A0704 at 833.451 kb on + strand, within Rru_A0704 at 833.452 kb on - strand, within Rru_A0704 at 833.452 kb on - strand, within Rru_A0704 at 833.533 kb on - strand at 833.614 kb on - strand at 834.107 kb on - strand at 834.191 kb on + strand at 834.299 kb on + strand, within Rru_A0706 at 834.300 kb on - strand, within Rru_A0706 at 834.300 kb on - strand, within Rru_A0706 at 834.300 kb on - strand, within Rru_A0706 at 834.530 kb on - strand, within Rru_A0706
Per-strain Table
Position Strand Gene LocusTag Fraction carbon source anaerobic Succinic Acid 31.25 mM remove 831,984 + -2.2 831,984 + -4.1 831,985 - -0.8 831,998 + -2.2 832,128 + Rru_A0703 0.19 +0.8 832,129 - Rru_A0703 0.19 +0.5 832,131 - Rru_A0703 0.19 -0.2 832,167 + Rru_A0703 0.25 +0.2 832,445 + Rru_A0703 0.65 +0.1 832,446 - Rru_A0703 0.65 +0.1 832,529 - Rru_A0703 0.77 -1.2 832,754 + +1.8 832,784 + -3.1 832,880 + Rru_A0704 0.15 -1.5 832,881 - Rru_A0704 0.15 +1.8 832,881 - Rru_A0704 0.15 -0.5 832,881 - Rru_A0704 0.15 -0.4 832,958 + Rru_A0704 0.25 +1.4 832,959 - Rru_A0704 0.25 +0.6 833,084 + Rru_A0704 0.41 -1.0 833,085 - Rru_A0704 0.42 -0.6 833,085 - Rru_A0704 0.42 +1.8 833,273 + Rru_A0704 0.66 +1.8 833,274 - Rru_A0704 0.66 +0.4 833,274 - Rru_A0704 0.66 +1.9 833,274 - Rru_A0704 0.66 +0.7 833,274 - Rru_A0704 0.66 -0.9 833,274 - Rru_A0704 0.66 -0.8 833,274 - Rru_A0704 0.66 -0.5 833,451 + Rru_A0704 0.89 +0.6 833,452 - Rru_A0704 0.89 +0.8 833,452 - Rru_A0704 0.89 -2.8 833,533 - +1.8 833,614 - -2.3 834,107 - -2.1 834,191 + -0.6 834,299 + Rru_A0706 0.17 -2.1 834,300 - Rru_A0706 0.17 +1.0 834,300 - Rru_A0706 0.17 -2.3 834,300 - Rru_A0706 0.17 -2.9 834,530 - Rru_A0706 0.41 +0.3
Or see this region's nucleotide sequence