Strain Fitness in Rhodospirillum rubrum S1H around Rru_B0002

Experiment: carbon source anaerobic Succinic Acid 31.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRru_B0001 and Rru_B0002 are separated by 71 nucleotidesRru_B0002 and Rru_B0003 are separated by 80 nucleotides Rru_B0001: Rru_B0001 - putative partition protein (NCBI), at 254 to 904 _B0001 Rru_B0002: Rru_B0002 - hypothetical protein (NCBI), at 976 to 1,224 _B0002 Rru_B0003: Rru_B0003 - Glycosyl transferase, group 1 (NCBI), at 1,305 to 2,369 _B0003 Position (kb) 0 1 2Strain fitness (log2 ratio) -1 0 1 2 3 4at 2.116 kb on - strand, within Rru_B0003

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Per-strain Table

Position Strand Gene LocusTag Fraction carbon source anaerobic Succinic Acid 31.25 mM
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2,116 - Rru_B0003 0.76 +4.1

Or see this region's nucleotide sequence