Experiment: Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5820 and Pf6N2E2_5821 are separated by 107 nucleotides Pf6N2E2_5821 and Pf6N2E2_5822 are separated by 145 nucleotides
Pf6N2E2_5820 - FIG00957914: hypothetical protein, at 6,637,900 to 6,638,688
_5820
Pf6N2E2_5821 - Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase, at 6,638,796 to 6,639,758
_5821
Pf6N2E2_5822 - Chorismate synthase (EC 4.2.3.5), at 6,639,904 to 6,640,995
_5822
Position (kb)
6638
6639
6640 Strain fitness (log2 ratio)
-2
-1
0
1 at 6638.189 kb on + strand, within Pf6N2E2_5820 at 6638.190 kb on - strand, within Pf6N2E2_5820 at 6638.190 kb on - strand, within Pf6N2E2_5820 at 6638.320 kb on - strand, within Pf6N2E2_5820 at 6638.516 kb on + strand, within Pf6N2E2_5820 at 6638.688 kb on + strand at 6638.688 kb on + strand at 6638.788 kb on - strand at 6638.875 kb on + strand at 6638.875 kb on + strand at 6638.875 kb on + strand at 6638.875 kb on + strand at 6638.875 kb on + strand at 6638.875 kb on + strand at 6638.876 kb on - strand at 6638.930 kb on + strand, within Pf6N2E2_5821 at 6639.091 kb on + strand, within Pf6N2E2_5821 at 6639.092 kb on - strand, within Pf6N2E2_5821 at 6639.092 kb on - strand, within Pf6N2E2_5821 at 6639.092 kb on - strand, within Pf6N2E2_5821 at 6639.099 kb on + strand, within Pf6N2E2_5821 at 6639.100 kb on - strand, within Pf6N2E2_5821 at 6639.100 kb on - strand, within Pf6N2E2_5821 at 6639.100 kb on - strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.406 kb on + strand, within Pf6N2E2_5821 at 6639.407 kb on - strand, within Pf6N2E2_5821 at 6639.407 kb on - strand, within Pf6N2E2_5821 at 6639.407 kb on - strand, within Pf6N2E2_5821 at 6639.407 kb on - strand, within Pf6N2E2_5821 at 6639.407 kb on - strand, within Pf6N2E2_5821 at 6639.573 kb on - strand, within Pf6N2E2_5821 at 6639.731 kb on + strand at 6639.732 kb on - strand at 6639.732 kb on - strand at 6639.732 kb on - strand at 6639.738 kb on + strand at 6639.738 kb on + strand at 6639.739 kb on - strand at 6639.739 kb on - strand at 6639.739 kb on - strand at 6639.739 kb on - strand at 6639.825 kb on + strand at 6639.842 kb on + strand at 6639.842 kb on + strand at 6639.842 kb on + strand at 6639.842 kb on + strand at 6639.842 kb on + strand at 6639.843 kb on - strand at 6639.843 kb on - strand at 6639.843 kb on - strand at 6639.843 kb on - strand at 6639.844 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 2 mM remove 6,638,189 + Pf6N2E2_5820 0.37 -0.6 6,638,190 - Pf6N2E2_5820 0.37 -0.3 6,638,190 - Pf6N2E2_5820 0.37 +1.4 6,638,320 - Pf6N2E2_5820 0.53 -1.1 6,638,516 + Pf6N2E2_5820 0.78 +0.4 6,638,688 + +0.1 6,638,688 + +0.4 6,638,788 - -0.5 6,638,875 + +1.1 6,638,875 + +0.2 6,638,875 + -0.9 6,638,875 + -2.2 6,638,875 + +0.6 6,638,875 + -0.1 6,638,876 - +0.1 6,638,930 + Pf6N2E2_5821 0.14 +0.5 6,639,091 + Pf6N2E2_5821 0.31 -1.3 6,639,092 - Pf6N2E2_5821 0.31 +0.1 6,639,092 - Pf6N2E2_5821 0.31 +0.1 6,639,092 - Pf6N2E2_5821 0.31 -0.7 6,639,099 + Pf6N2E2_5821 0.31 +0.2 6,639,100 - Pf6N2E2_5821 0.32 -0.1 6,639,100 - Pf6N2E2_5821 0.32 -0.8 6,639,100 - Pf6N2E2_5821 0.32 -0.7 6,639,406 + Pf6N2E2_5821 0.63 -0.7 6,639,406 + Pf6N2E2_5821 0.63 +0.2 6,639,406 + Pf6N2E2_5821 0.63 +0.0 6,639,406 + Pf6N2E2_5821 0.63 +0.2 6,639,406 + Pf6N2E2_5821 0.63 +0.2 6,639,406 + Pf6N2E2_5821 0.63 +0.4 6,639,406 + Pf6N2E2_5821 0.63 -1.3 6,639,406 + Pf6N2E2_5821 0.63 -1.9 6,639,406 + Pf6N2E2_5821 0.63 -0.3 6,639,407 - Pf6N2E2_5821 0.63 -0.2 6,639,407 - Pf6N2E2_5821 0.63 -0.4 6,639,407 - Pf6N2E2_5821 0.63 -1.1 6,639,407 - Pf6N2E2_5821 0.63 -0.5 6,639,407 - Pf6N2E2_5821 0.63 -0.5 6,639,573 - Pf6N2E2_5821 0.81 -0.8 6,639,731 + -0.7 6,639,732 - -0.1 6,639,732 - +0.6 6,639,732 - -0.2 6,639,738 + +0.6 6,639,738 + +1.0 6,639,739 - -0.2 6,639,739 - +0.1 6,639,739 - +0.3 6,639,739 - -0.8 6,639,825 + -1.1 6,639,842 + -0.7 6,639,842 + +0.4 6,639,842 + -0.2 6,639,842 + -0.3 6,639,842 + +0.4 6,639,843 - +0.4 6,639,843 - -1.1 6,639,843 - +0.5 6,639,843 - +0.5 6,639,844 + -0.9
Or see this region's nucleotide sequence