Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5819
Experiment: Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 2 mM |
---|---|---|---|---|---|
remove | |||||
6,636,063 | + | Pf6N2E2_5818 | 0.17 | +0.7 | |
6,636,648 | + | -0.6 | |||
6,636,648 | + | -0.1 | |||
6,636,680 | + | +0.2 | |||
6,636,681 | - | +0.1 | |||
6,636,681 | - | -0.2 | |||
6,636,701 | - | +0.7 | |||
6,636,772 | + | +0.9 | |||
6,636,974 | - | Pf6N2E2_5819 | 0.18 | -1.8 | |
6,637,060 | + | Pf6N2E2_5819 | 0.28 | +0.2 | |
6,637,060 | + | Pf6N2E2_5819 | 0.28 | -1.2 | |
6,637,240 | + | Pf6N2E2_5819 | 0.48 | +0.3 | |
6,637,240 | + | Pf6N2E2_5819 | 0.48 | +0.9 | |
6,637,277 | + | Pf6N2E2_5819 | 0.52 | +1.2 | |
6,637,278 | - | Pf6N2E2_5819 | 0.52 | +0.5 | |
6,637,414 | + | Pf6N2E2_5819 | 0.67 | +1.2 | |
6,637,414 | + | Pf6N2E2_5819 | 0.67 | -0.0 | |
6,637,415 | - | Pf6N2E2_5819 | 0.67 | -1.4 | |
6,637,415 | - | Pf6N2E2_5819 | 0.67 | +0.7 | |
6,637,415 | - | Pf6N2E2_5819 | 0.67 | +0.1 | |
6,637,454 | - | Pf6N2E2_5819 | 0.71 | +0.5 | |
6,637,556 | + | Pf6N2E2_5819 | 0.82 | +0.5 | |
6,637,556 | + | Pf6N2E2_5819 | 0.82 | +0.6 | |
6,637,557 | - | Pf6N2E2_5819 | 0.82 | -0.6 | |
6,638,189 | + | Pf6N2E2_5820 | 0.37 | -0.6 | |
6,638,190 | - | Pf6N2E2_5820 | 0.37 | -0.3 | |
6,638,190 | - | Pf6N2E2_5820 | 0.37 | +1.4 | |
6,638,320 | - | Pf6N2E2_5820 | 0.53 | -1.1 | |
6,638,516 | + | Pf6N2E2_5820 | 0.78 | +0.4 | |
6,638,688 | + | +0.1 | |||
6,638,688 | + | +0.4 |
Or see this region's nucleotide sequence