Experiment: Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2902 and Pf6N2E2_2903 are separated by 140 nucleotides Pf6N2E2_2903 and Pf6N2E2_2904 are separated by 44 nucleotides Pf6N2E2_2904 and Pf6N2E2_2905 are separated by 34 nucleotides
Pf6N2E2_2902 - TonB-dependent hemin , ferrichrome receptor, at 3,391,955 to 3,394,477
_2902
Pf6N2E2_2903 - Heme oxygenase HemO, associated with heme uptake, at 3,394,618 to 3,395,208
_2903
Pf6N2E2_2904 - Hypothetical protein DUF454, at 3,395,253 to 3,395,693
_2904
Pf6N2E2_2905 - CoA transferase, CAIB/BAIF family, at 3,395,728 to 3,397,074
_2905
Position (kb)
3394
3395
3396 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3393.677 kb on + strand, within Pf6N2E2_2902 at 3393.678 kb on - strand, within Pf6N2E2_2902 at 3393.678 kb on - strand, within Pf6N2E2_2902 at 3393.695 kb on + strand, within Pf6N2E2_2902 at 3393.695 kb on + strand, within Pf6N2E2_2902 at 3393.696 kb on - strand, within Pf6N2E2_2902 at 3393.784 kb on + strand, within Pf6N2E2_2902 at 3393.785 kb on - strand, within Pf6N2E2_2902 at 3393.831 kb on - strand, within Pf6N2E2_2902 at 3393.887 kb on + strand, within Pf6N2E2_2902 at 3393.887 kb on + strand, within Pf6N2E2_2902 at 3393.888 kb on - strand, within Pf6N2E2_2902 at 3393.888 kb on - strand, within Pf6N2E2_2902 at 3393.896 kb on + strand, within Pf6N2E2_2902 at 3393.897 kb on - strand, within Pf6N2E2_2902 at 3394.043 kb on + strand, within Pf6N2E2_2902 at 3394.043 kb on + strand, within Pf6N2E2_2902 at 3394.043 kb on + strand, within Pf6N2E2_2902 at 3394.043 kb on + strand, within Pf6N2E2_2902 at 3394.044 kb on - strand, within Pf6N2E2_2902 at 3394.044 kb on - strand, within Pf6N2E2_2902 at 3394.044 kb on - strand, within Pf6N2E2_2902 at 3394.044 kb on - strand, within Pf6N2E2_2902 at 3394.064 kb on + strand, within Pf6N2E2_2902 at 3394.071 kb on - strand, within Pf6N2E2_2902 at 3394.142 kb on + strand, within Pf6N2E2_2902 at 3394.289 kb on + strand at 3394.289 kb on + strand at 3394.290 kb on - strand at 3394.290 kb on - strand at 3394.328 kb on + strand at 3394.328 kb on + strand at 3394.329 kb on - strand at 3394.329 kb on - strand at 3394.329 kb on - strand at 3394.349 kb on + strand at 3394.349 kb on + strand at 3394.350 kb on - strand at 3394.350 kb on - strand at 3394.350 kb on - strand at 3394.445 kb on - strand at 3394.472 kb on - strand at 3394.623 kb on + strand at 3394.624 kb on - strand at 3394.624 kb on - strand at 3394.789 kb on + strand, within Pf6N2E2_2903 at 3394.789 kb on + strand, within Pf6N2E2_2903 at 3394.790 kb on - strand, within Pf6N2E2_2903 at 3394.790 kb on - strand, within Pf6N2E2_2903 at 3394.790 kb on - strand, within Pf6N2E2_2903 at 3394.790 kb on - strand, within Pf6N2E2_2903 at 3395.166 kb on + strand at 3395.167 kb on - strand at 3395.189 kb on - strand at 3395.189 kb on - strand at 3395.301 kb on + strand, within Pf6N2E2_2904 at 3395.566 kb on - strand, within Pf6N2E2_2904 at 3395.566 kb on - strand, within Pf6N2E2_2904 at 3395.696 kb on + strand at 3395.696 kb on + strand at 3395.696 kb on + strand at 3395.696 kb on + strand at 3395.696 kb on + strand at 3395.696 kb on + strand at 3395.696 kb on + strand at 3395.696 kb on + strand at 3395.696 kb on + strand at 3395.697 kb on - strand at 3395.697 kb on - strand at 3395.697 kb on - strand at 3395.697 kb on - strand at 3395.697 kb on - strand at 3395.712 kb on + strand at 3395.712 kb on + strand at 3396.010 kb on + strand, within Pf6N2E2_2905 at 3396.010 kb on + strand, within Pf6N2E2_2905 at 3396.011 kb on - strand, within Pf6N2E2_2905
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 2 mM remove 3,393,677 + Pf6N2E2_2902 0.68 +0.3 3,393,678 - Pf6N2E2_2902 0.68 +0.5 3,393,678 - Pf6N2E2_2902 0.68 -0.8 3,393,695 + Pf6N2E2_2902 0.69 -0.3 3,393,695 + Pf6N2E2_2902 0.69 +0.6 3,393,696 - Pf6N2E2_2902 0.69 -0.5 3,393,784 + Pf6N2E2_2902 0.72 +0.4 3,393,785 - Pf6N2E2_2902 0.73 +0.4 3,393,831 - Pf6N2E2_2902 0.74 +0.0 3,393,887 + Pf6N2E2_2902 0.77 -0.7 3,393,887 + Pf6N2E2_2902 0.77 +0.8 3,393,888 - Pf6N2E2_2902 0.77 +0.2 3,393,888 - Pf6N2E2_2902 0.77 -0.1 3,393,896 + Pf6N2E2_2902 0.77 -0.6 3,393,897 - Pf6N2E2_2902 0.77 -0.9 3,394,043 + Pf6N2E2_2902 0.83 -1.4 3,394,043 + Pf6N2E2_2902 0.83 +0.6 3,394,043 + Pf6N2E2_2902 0.83 +1.0 3,394,043 + Pf6N2E2_2902 0.83 +0.9 3,394,044 - Pf6N2E2_2902 0.83 -0.2 3,394,044 - Pf6N2E2_2902 0.83 +1.4 3,394,044 - Pf6N2E2_2902 0.83 +0.6 3,394,044 - Pf6N2E2_2902 0.83 +0.3 3,394,064 + Pf6N2E2_2902 0.84 -0.4 3,394,071 - Pf6N2E2_2902 0.84 -0.7 3,394,142 + Pf6N2E2_2902 0.87 +1.5 3,394,289 + +1.3 3,394,289 + +0.4 3,394,290 - +1.5 3,394,290 - -0.0 3,394,328 + -0.6 3,394,328 + +0.7 3,394,329 - -0.8 3,394,329 - +0.2 3,394,329 - +0.2 3,394,349 + +0.4 3,394,349 + +0.6 3,394,350 - +0.9 3,394,350 - +0.1 3,394,350 - -0.4 3,394,445 - +2.2 3,394,472 - -0.9 3,394,623 + +1.8 3,394,624 - +0.0 3,394,624 - +0.2 3,394,789 + Pf6N2E2_2903 0.29 -0.8 3,394,789 + Pf6N2E2_2903 0.29 +0.0 3,394,790 - Pf6N2E2_2903 0.29 -0.3 3,394,790 - Pf6N2E2_2903 0.29 -0.6 3,394,790 - Pf6N2E2_2903 0.29 -0.4 3,394,790 - Pf6N2E2_2903 0.29 -0.3 3,395,166 + +0.2 3,395,167 - +1.2 3,395,189 - +0.2 3,395,189 - +0.7 3,395,301 + Pf6N2E2_2904 0.11 +0.3 3,395,566 - Pf6N2E2_2904 0.71 -0.1 3,395,566 - Pf6N2E2_2904 0.71 +0.4 3,395,696 + -0.2 3,395,696 + +0.6 3,395,696 + +0.5 3,395,696 + +0.6 3,395,696 + +0.8 3,395,696 + +0.8 3,395,696 + -0.1 3,395,696 + +0.7 3,395,696 + -1.8 3,395,697 - +0.4 3,395,697 - -0.0 3,395,697 - +0.2 3,395,697 - +1.3 3,395,697 - +0.7 3,395,712 + +1.5 3,395,712 + +1.2 3,396,010 + Pf6N2E2_2905 0.21 +0.5 3,396,010 + Pf6N2E2_2905 0.21 +0.1 3,396,011 - Pf6N2E2_2905 0.21 +0.6
Or see this region's nucleotide sequence