Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3025

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,401,558	+		Pf1N1B4_3024	0.42	-0.6
3,401,558	+		Pf1N1B4_3024	0.42	+1.0
3,401,558	+		Pf1N1B4_3024	0.42	-1.2
3,401,559	-		Pf1N1B4_3024	0.42	+1.4
3,401,559	-		Pf1N1B4_3024	0.42	+0.3
3,401,559	-		Pf1N1B4_3024	0.42	-0.2
3,401,577	+		Pf1N1B4_3024	0.44	-1.3
3,401,577	+		Pf1N1B4_3024	0.44	-2.3
3,401,577	+		Pf1N1B4_3024	0.44	-0.2
3,401,578	-		Pf1N1B4_3024	0.44	-1.0
3,401,578	-		Pf1N1B4_3024	0.44	+0.6
3,401,584	+		Pf1N1B4_3024	0.44	+0.6
3,401,585	-		Pf1N1B4_3024	0.44	-2.0
3,401,728	+		Pf1N1B4_3024	0.54	-2.0
3,401,729	-		Pf1N1B4_3024	0.54	+0.0
3,401,778	-		Pf1N1B4_3024	0.58	+0.7
3,401,787	+		Pf1N1B4_3024	0.58	+0.4
3,401,787	+				+1.6
3,401,787	+		Pf1N1B4_3024	0.58	+0.3
3,401,787	+		Pf1N1B4_3024	0.58	-1.6
3,401,787	+		Pf1N1B4_3024	0.58	-1.0
3,401,788	-		Pf1N1B4_3024	0.59	-0.4
3,401,788	-		Pf1N1B4_3024	0.59	-1.6
3,401,788	-		Pf1N1B4_3024	0.59	+0.2
3,401,788	-		Pf1N1B4_3024	0.59	+0.4
3,401,791	+		Pf1N1B4_3024	0.59	+0.0
3,401,791	+		Pf1N1B4_3024	0.59	+0.3
3,401,791	+		Pf1N1B4_3024	0.59	+0.9
3,401,791	+		Pf1N1B4_3024	0.59	-0.1
3,401,791	+		Pf1N1B4_3024	0.59	-2.3
3,401,792	-		Pf1N1B4_3024	0.59	+0.0
3,401,792	-		Pf1N1B4_3024	0.59	+1.9
3,401,792	-		Pf1N1B4_3024	0.59	-0.4
3,401,792	-		Pf1N1B4_3024	0.59	-0.2
3,401,877	+		Pf1N1B4_3024	0.65	-0.7
3,401,877	+		Pf1N1B4_3024	0.65	-0.7
3,401,877	+		Pf1N1B4_3024	0.65	+0.0
3,401,878	-		Pf1N1B4_3024	0.65	+0.3
3,401,880	+		Pf1N1B4_3024	0.65	+0.0
3,401,930	+		Pf1N1B4_3024	0.68	+1.3
3,402,002	+		Pf1N1B4_3024	0.74	-0.4
3,402,002	+		Pf1N1B4_3024	0.74	+0.0
3,402,003	-		Pf1N1B4_3024	0.74	+0.8
3,402,003	-		Pf1N1B4_3024	0.74	+0.0
3,402,101	+		Pf1N1B4_3024	0.80	+0.2
3,402,101	+				-1.0
3,402,102	-		Pf1N1B4_3024	0.81	+0.7
3,402,287	-				-1.0
3,402,382	+				-0.1
3,402,382	+				+2.6
3,402,382	+				-0.6
3,402,382	+				-1.1
3,402,382	+				+0.6
3,402,382	+				+0.4
3,402,383	-				+1.3
3,402,383	-				-1.8
3,402,383	-				+1.5
3,402,383	-				+0.0
3,402,383	-				+0.0
3,402,383	-				-2.3
3,402,403	+				+0.8
3,402,403	+				-0.7
3,402,403	+				-1.3
3,402,403	+				+0.3
3,402,403	+				-2.3
3,402,403	+				-0.1
3,402,403	+				-1.6
3,402,403	+				+0.0
3,402,403	+				+0.8
3,402,403	+				+1.0
3,402,403	+				-1.6
3,402,403	+				+0.0
3,402,403	+				-0.7
3,402,403	+				+1.4
3,402,403	+				-1.0
3,402,403	+				-0.1
3,402,403	+				+0.6
3,402,404	-				-1.0
3,402,404	-				+0.0
3,402,404	-				+0.3
3,402,404	-				+0.1
3,402,404	-				+0.4
3,402,404	-				-2.0
3,402,404	-				+0.7
3,402,404	-				-0.4
3,402,404	-				+2.2
3,402,404	-				+0.0
3,402,404	-				+0.4
3,402,404	-				+0.4
3,402,404	-				+1.0
3,402,404	-				+1.6
3,402,404	-				+1.0
3,402,486	+				+0.5
3,402,486	+				-0.2
3,402,487	-				-0.2
3,402,487	-				+2.0
3,402,487	-				-0.8
3,402,487	-				+0.4
3,402,555	+				-0.3
3,402,600	+				+0.6
3,402,600	+				+0.5
3,402,600	+				+1.8
3,402,603	+				+0.0
3,402,603	+				+1.0
3,402,603	+				-0.3
3,402,603	+				-0.3
3,402,604	-				+0.0
3,402,825	+		Pf1N1B4_3025	0.33	-1.4
3,402,825	+		Pf1N1B4_3025	0.33	-1.2
3,402,882	+		Pf1N1B4_3025	0.40	+1.6
3,402,883	-		Pf1N1B4_3025	0.40	+1.4
3,402,883	-		Pf1N1B4_3025	0.40	-2.0
3,402,883	-		Pf1N1B4_3025	0.40	+0.0
3,402,883	-				+0.9
3,402,883	-		Pf1N1B4_3025	0.40	-0.8
3,402,883	-		Pf1N1B4_3025	0.40	-1.3
3,402,918	+		Pf1N1B4_3025	0.44	-1.0
3,402,918	+		Pf1N1B4_3025	0.44	+0.0
3,402,919	-		Pf1N1B4_3025	0.44	+0.0
3,403,335	-				-2.3
3,403,366	+				-1.0
3,403,366	+				+0.4
3,403,366	+				+1.0
3,403,367	-				+0.6
3,403,367	-				+1.3
3,403,367	-				+1.2
3,403,411	+				+1.6
3,403,411	+				+0.0
3,403,411	+				-0.4
3,403,411	+				-0.8
3,403,411	+				+0.5
3,403,411	+				-0.3
3,403,412	-				+2.3
3,403,412	-				+1.3
3,403,412	-				-0.6
3,403,412	-				+1.3
3,403,463	+		Pf1N1B4_3026	0.10	-0.4
3,403,489	+		Pf1N1B4_3026	0.13	+1.0
3,403,490	-		Pf1N1B4_3026	0.13	-0.4
3,403,665	+		Pf1N1B4_3026	0.31	-0.8
3,403,666	-		Pf1N1B4_3026	0.31	+0.1
3,403,666	-		Pf1N1B4_3026	0.31	-0.5
3,403,732	+		Pf1N1B4_3026	0.38	+1.0
3,403,733	-		Pf1N1B4_3026	0.39	-0.7
3,403,733	-		Pf1N1B4_3026	0.39	+0.3
3,403,888	+		Pf1N1B4_3026	0.55	-0.1
3,403,903	+		Pf1N1B4_3026	0.56	-0.8
3,403,903	+		Pf1N1B4_3026	0.56	-1.0
3,403,903	+		Pf1N1B4_3026	0.56	-1.6
3,403,904	-		Pf1N1B4_3026	0.57	+1.0
3,403,904	-		Pf1N1B4_3026	0.57	-0.1
3,403,904	-		Pf1N1B4_3026	0.57	+1.3
3,403,936	+		Pf1N1B4_3026	0.60	-0.6
3,403,967	-		Pf1N1B4_3026	0.63	-0.3
3,403,978	+		Pf1N1B4_3026	0.64	+0.4
3,403,978	+		Pf1N1B4_3026	0.64	+0.9
3,403,978	+		Pf1N1B4_3026	0.64	+0.8
3,403,978	+		Pf1N1B4_3026	0.64	-1.7
3,403,978	+		Pf1N1B4_3026	0.64	+1.0
3,403,978	+		Pf1N1B4_3026	0.64	+0.0
3,403,978	+		Pf1N1B4_3026	0.64	+0.6
3,403,978	+				+0.0
3,403,979	-		Pf1N1B4_3026	0.64	+1.8
3,403,979	-		Pf1N1B4_3026	0.64	+0.0
3,403,979	-		Pf1N1B4_3026	0.64	-0.1
3,403,979	-		Pf1N1B4_3026	0.64	-2.6
3,403,979	-		Pf1N1B4_3026	0.64	-0.7
3,403,982	-		Pf1N1B4_3026	0.65	-0.6
3,403,982	-		Pf1N1B4_3026	0.65	+0.0
3,404,140	+		Pf1N1B4_3026	0.81	+2.0
3,404,140	+		Pf1N1B4_3026	0.81	+0.0
3,404,140	+		Pf1N1B4_3026	0.81	+0.7
3,404,140	+		Pf1N1B4_3026	0.81	-2.0
3,404,141	-				+0.0
3,404,179	+		Pf1N1B4_3026	0.86	-2.0
3,404,179	+		Pf1N1B4_3026	0.86	-1.0
3,404,227	+				-1.0
3,404,227	+				+3.2
3,404,227	+				+0.5
3,404,228	-				-1.0
3,404,228	-				-0.1
3,404,245	+				+1.3