Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2853

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,199,252	-				+0.0
3,199,291	+				+1.6
3,199,291	+				+0.3
3,199,410	+				+0.7
3,199,410	+				+0.4
3,199,410	+				-0.3
3,199,411	-				+0.0
3,199,411	-				+0.4
3,199,436	+		Pf1N1B4_2851	0.29	-1.0
3,199,437	-		Pf1N1B4_2851	0.30	-1.7
3,199,437	-		Pf1N1B4_2851	0.30	+0.5
3,199,461	+		Pf1N1B4_2851	0.47	-0.6
3,199,530	+				-2.3
3,199,531	-				+0.0
3,199,531	-				+0.5
3,199,531	-				+0.6
3,199,531	-				+1.0
3,199,535	+				+0.4
3,199,535	+				+1.3
3,199,535	+				+0.1
3,199,591	+				+1.8
3,199,592	-				+1.3
3,199,598	+				+0.0
3,199,598	+				+1.0
3,199,598	+				-0.8
3,199,598	+				-1.3
3,199,599	-				+1.3
3,199,599	-				+0.0
3,199,599	-				-0.6
3,199,710	+		Pf1N1B4_2852	0.16	-0.7
3,199,710	+		Pf1N1B4_2852	0.16	-0.6
3,199,710	+		Pf1N1B4_2852	0.16	-1.4
3,199,710	+		Pf1N1B4_2852	0.16	-1.0
3,199,710	+		Pf1N1B4_2852	0.16	+0.0
3,199,710	+				+0.0
3,199,710	+		Pf1N1B4_2852	0.16	+0.0
3,199,710	+		Pf1N1B4_2852	0.16	-0.6
3,199,710	+		Pf1N1B4_2852	0.16	+0.0
3,199,710	+		Pf1N1B4_2852	0.16	-0.6
3,199,711	-		Pf1N1B4_2852	0.16	-0.1
3,199,711	-		Pf1N1B4_2852	0.16	+0.6
3,199,711	-		Pf1N1B4_2852	0.16	+0.3
3,199,711	-		Pf1N1B4_2852	0.16	+0.0
3,199,711	-		Pf1N1B4_2852	0.16	-1.0
3,199,711	-		Pf1N1B4_2852	0.16	-1.0
3,199,711	-		Pf1N1B4_2852	0.16	+0.2
3,199,711	-		Pf1N1B4_2852	0.16	-1.3
3,199,711	-		Pf1N1B4_2852	0.16	-1.3
3,199,711	-		Pf1N1B4_2852	0.16	-0.3
3,199,752	+		Pf1N1B4_2852	0.27	+0.7
3,199,857	+		Pf1N1B4_2852	0.55	+0.6
3,199,857	+		Pf1N1B4_2852	0.55	+2.3
3,199,890	+		Pf1N1B4_2852	0.63	+1.3
3,199,890	+		Pf1N1B4_2852	0.63	+1.1
3,199,890	+		Pf1N1B4_2852	0.63	+1.0
3,199,890	+		Pf1N1B4_2852	0.63	+0.6
3,199,890	+		Pf1N1B4_2852	0.63	+0.8
3,199,890	+		Pf1N1B4_2852	0.63	+1.0
3,199,890	+		Pf1N1B4_2852	0.63	+0.4
3,199,891	-		Pf1N1B4_2852	0.64	-1.0
3,199,891	-		Pf1N1B4_2852	0.64	+1.4
3,199,891	-		Pf1N1B4_2852	0.64	+0.9
3,199,908	+		Pf1N1B4_2852	0.68	+0.2
3,199,908	+		Pf1N1B4_2852	0.68	-0.6
3,199,909	-		Pf1N1B4_2852	0.68	+1.0
3,199,909	-		Pf1N1B4_2852	0.68	-1.0
3,199,965	+		Pf1N1B4_2852	0.83	-3.0
3,199,965	+		Pf1N1B4_2852	0.83	-0.2
3,200,093	+				+0.4
3,200,093	+				+0.6
3,200,093	+				+0.3
3,200,093	+				+0.2
3,200,093	+				+0.3
3,200,093	+				+0.0
3,200,093	+				+0.4
3,200,094	-				-0.4
3,200,094	-				-0.4
3,200,149	+				+0.4
3,200,149	+				+3.0
3,200,152	+				+0.0
3,200,152	+				-0.4
3,200,153	-				-1.6
3,200,219	+				-0.8
3,200,226	+				+0.2
3,200,226	+				-0.4
3,200,362	-		Pf1N1B4_2853	0.16	+0.2
3,200,441	-		Pf1N1B4_2853	0.25	-2.8
3,200,472	+		Pf1N1B4_2853	0.29	-1.6
3,200,675	+		Pf1N1B4_2853	0.52	+0.0
3,201,140	+				-2.0
3,201,140	+				+0.0
3,201,140	+				+0.0
3,201,140	+				-1.8
3,201,141	-				+0.2
3,201,141	-				-0.3
3,201,141	-				-1.0
3,201,141	-				+0.2
3,201,141	-				-0.7
3,201,141	-				+2.6
3,201,141	-				+1.0
3,201,141	-				-0.3
3,201,214	-		Pf1N1B4_2854	0.16	+0.8
3,201,432	+		Pf1N1B4_2854	0.44	+1.3
3,201,433	-		Pf1N1B4_2854	0.44	+0.2
3,201,433	-		Pf1N1B4_2854	0.44	+0.7
3,201,433	-		Pf1N1B4_2854	0.44	+0.3
3,201,433	-		Pf1N1B4_2854	0.44	+0.0
3,201,433	-		Pf1N1B4_2854	0.44	+1.6
3,201,433	-		Pf1N1B4_2854	0.44	-0.3
3,201,433	-		Pf1N1B4_2854	0.44	-1.0
3,201,614	+		Pf1N1B4_2854	0.66	+0.0
3,201,684	-		Pf1N1B4_2854	0.75	+0.7
3,201,809	+				+0.3
3,201,809	+				-0.1
3,201,810	-				-2.3
3,201,810	-				+1.3
3,201,810	-				+0.0
3,201,810	-				+0.3
3,201,810	-				+0.4
3,201,810	-				+1.8
3,201,897	+				+0.5
3,201,897	+				+2.8
3,201,897	+				-0.7
3,201,897	+				-0.8
3,201,915	+				-0.5
3,201,915	+				+1.0
3,201,916	-				+0.0
3,201,945	+				+0.0
3,201,945	+				+2.3
3,201,945	+				+0.0
3,201,945	+				+2.2
3,201,945	+				+0.0
3,201,945	+				+1.0
3,201,945	+				+0.2
3,201,945	+				+0.0
3,201,945	+				+0.3
3,201,945	+				+0.4
3,201,945	+				-0.0
3,201,945	+				+1.3
3,201,946	-				-0.4
3,201,946	-				-0.6
3,201,947	+				+0.4
3,201,947	+				-2.0
3,201,947	+				-0.6
3,201,948	-				+0.7
3,201,976	+				+0.6
3,201,976	+				+0.0
3,201,976	+				+0.0
3,201,976	+				-1.6
3,201,976	+				-0.8
3,201,976	+				+1.0
3,201,976	+				-0.7
3,201,976	+				+0.4
3,201,976	+				+0.7
3,201,976	+				+0.0
3,201,976	+				-0.3
3,201,976	+				-1.0
3,201,976	+				-1.0
3,201,976	+				+0.2
3,201,976	+				+0.6
3,201,977	-				-0.4
3,201,977	-				+0.4
3,201,977	-				+1.8
3,202,026	+				-2.0
3,202,026	+				-0.4
3,202,026	+				+1.0
3,202,026	+				+0.2
3,202,026	+				-0.1
3,202,026	+				+0.5
3,202,026	+				-0.6
3,202,026	+				-0.8
3,202,026	+				+0.3
3,202,026	+				+1.3
3,202,026	+				-1.0
3,202,026	+				+0.4
3,202,026	+				-0.4
3,202,027	-				+0.7
3,202,027	-				+0.6
3,202,028	+				-1.0
3,202,028	+				+1.6
3,202,028	+				-0.3
3,202,028	+				+0.0
3,202,028	+				-0.3
3,202,028	+				-1.3
3,202,028	+				+0.0
3,202,029	-				-1.0
3,202,066	+				-0.8
3,202,077	+				+0.6