Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_277

Experiment: Aluminum chloride 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_274 and Ac3H11_275 are separated by 14 nucleotidesAc3H11_275 and Ac3H11_276 are separated by 83 nucleotidesAc3H11_276 and Ac3H11_277 are separated by 30 nucleotidesAc3H11_277 and Ac3H11_278 are separated by 54 nucleotides Ac3H11_274 - Probable MFS transporter precursor, at 99,458 to 100,717 _274 Ac3H11_275 - hypothetical protein, at 100,732 to 100,887 _275 Ac3H11_276 - Putative SAM-dependent methyltransferase Bucepa02006346, at 100,971 to 101,525 _276 Ac3H11_277 - 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7), at 101,556 to 102,455 _277 Ac3H11_278 - FIG002207: Probable transmembrane protein, at 102,510 to 103,604 _278 Position (kb) 101 102 103Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 100.586 kb on + strand, within Ac3H11_274at 100.586 kb on + strand, within Ac3H11_274at 100.586 kb on + strand, within Ac3H11_274at 100.587 kb on - strand, within Ac3H11_274at 100.587 kb on - strand, within Ac3H11_274at 100.587 kb on - strand, within Ac3H11_274at 100.592 kb on + strandat 100.592 kb on + strandat 100.592 kb on + strandat 100.593 kb on - strandat 100.593 kb on - strandat 100.593 kb on - strandat 100.593 kb on - strandat 100.593 kb on - strandat 100.593 kb on - strandat 100.593 kb on - strandat 100.610 kb on + strandat 100.610 kb on + strandat 100.610 kb on + strandat 100.610 kb on + strandat 100.610 kb on + strandat 100.610 kb on + strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.611 kb on - strandat 100.615 kb on + strandat 100.625 kb on + strandat 100.625 kb on + strandat 100.625 kb on + strandat 100.625 kb on + strandat 100.626 kb on - strandat 100.626 kb on - strandat 100.626 kb on - strandat 100.626 kb on - strandat 100.831 kb on + strand, within Ac3H11_275at 100.831 kb on + strand, within Ac3H11_275at 100.831 kb on + strand, within Ac3H11_275at 100.831 kb on + strand, within Ac3H11_275at 100.832 kb on - strand, within Ac3H11_275at 100.832 kb on - strand, within Ac3H11_275at 100.832 kb on - strand, within Ac3H11_275at 100.832 kb on - strand, within Ac3H11_275at 100.832 kb on - strand, within Ac3H11_275at 100.950 kb on - strandat 101.235 kb on + strand, within Ac3H11_276at 101.235 kb on + strand, within Ac3H11_276at 101.235 kb on + strand, within Ac3H11_276at 101.235 kb on + strand, within Ac3H11_276at 101.235 kb on + strand, within Ac3H11_276at 101.235 kb on + strand, within Ac3H11_276at 101.236 kb on - strand, within Ac3H11_276at 101.236 kb on - strand, within Ac3H11_276at 101.236 kb on - strand, within Ac3H11_276at 101.236 kb on - strand, within Ac3H11_276at 101.236 kb on - strand, within Ac3H11_276at 101.236 kb on - strand, within Ac3H11_276at 101.236 kb on - strand, within Ac3H11_276at 101.236 kb on - strand, within Ac3H11_276at 101.236 kb on - strand, within Ac3H11_276at 101.236 kb on - strand, within Ac3H11_276at 101.298 kb on + strand, within Ac3H11_276at 101.298 kb on + strand, within Ac3H11_276at 101.299 kb on - strand, within Ac3H11_276at 101.299 kb on - strand, within Ac3H11_276at 101.299 kb on - strand, within Ac3H11_276at 101.409 kb on + strand, within Ac3H11_276at 101.410 kb on - strand, within Ac3H11_276at 101.519 kb on + strandat 101.519 kb on + strandat 101.523 kb on + strandat 101.523 kb on + strandat 101.523 kb on + strandat 101.523 kb on + strandat 101.523 kb on + strandat 101.523 kb on + strandat 101.523 kb on + strandat 101.523 kb on + strandat 101.523 kb on + strandat 101.523 kb on + strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.524 kb on - strandat 101.536 kb on + strandat 101.536 kb on + strandat 101.579 kb on + strandat 101.579 kb on + strandat 101.634 kb on + strandat 101.666 kb on + strand, within Ac3H11_277at 101.889 kb on + strand, within Ac3H11_277at 101.889 kb on + strand, within Ac3H11_277at 101.889 kb on + strand, within Ac3H11_277at 101.892 kb on + strand, within Ac3H11_277at 101.892 kb on + strand, within Ac3H11_277at 101.892 kb on + strand, within Ac3H11_277at 101.892 kb on + strand, within Ac3H11_277at 101.892 kb on + strand, within Ac3H11_277at 101.892 kb on + strand, within Ac3H11_277at 101.973 kb on + strand, within Ac3H11_277at 101.973 kb on + strand, within Ac3H11_277at 101.973 kb on + strand, within Ac3H11_277at 101.973 kb on + strand, within Ac3H11_277at 101.973 kb on + strand, within Ac3H11_277at 101.973 kb on + strand, within Ac3H11_277at 102.106 kb on + strand, within Ac3H11_277at 102.106 kb on + strand, within Ac3H11_277at 102.106 kb on + strand, within Ac3H11_277at 102.126 kb on + strand, within Ac3H11_277at 102.126 kb on + strand, within Ac3H11_277at 102.126 kb on + strand, within Ac3H11_277

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum chloride 2 mM
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100,586 + Ac3H11_274 0.90 -0.2
100,586 + Ac3H11_274 0.90 -0.7
100,586 + Ac3H11_274 0.90 -0.6
100,587 - Ac3H11_274 0.90 +0.7
100,587 - Ac3H11_274 0.90 -0.8
100,587 - Ac3H11_274 0.90 -1.2
100,592 + -0.4
100,592 + +0.2
100,592 + +0.1
100,593 - +0.7
100,593 - -0.8
100,593 - -0.2
100,593 - +0.5
100,593 - +0.2
100,593 - +0.7
100,593 - +0.1
100,610 + -0.4
100,610 + +1.3
100,610 + +0.0
100,610 + -1.4
100,610 + -1.5
100,610 + -0.2
100,611 - -1.2
100,611 - -0.5
100,611 - -0.1
100,611 - +0.2
100,611 - -0.5
100,611 - +0.8
100,611 - +1.3
100,611 - -0.1
100,611 - +0.8
100,611 - +0.6
100,611 - +0.9
100,611 - +0.6
100,611 - +0.2
100,615 + +0.2
100,625 + +0.2
100,625 + +0.0
100,625 + -1.3
100,625 + +0.0
100,626 - -0.3
100,626 - +2.3
100,626 - +0.8
100,626 - +0.8
100,831 + Ac3H11_275 0.63 +0.3
100,831 + Ac3H11_275 0.63 -0.2
100,831 + Ac3H11_275 0.63 +0.1
100,831 + Ac3H11_275 0.63 +0.1
100,832 - Ac3H11_275 0.64 -1.2
100,832 - Ac3H11_275 0.64 -0.0
100,832 - Ac3H11_275 0.64 +0.3
100,832 - Ac3H11_275 0.64 -0.4
100,832 - Ac3H11_275 0.64 +1.0
100,950 - -1.3
101,235 + Ac3H11_276 0.48 +0.7
101,235 + Ac3H11_276 0.48 -0.8
101,235 + Ac3H11_276 0.48 -1.7
101,235 + Ac3H11_276 0.48 +0.9
101,235 + Ac3H11_276 0.48 +0.4
101,235 + Ac3H11_276 0.48 -1.8
101,236 - Ac3H11_276 0.48 -1.6
101,236 - Ac3H11_276 0.48 -0.5
101,236 - Ac3H11_276 0.48 +0.7
101,236 - Ac3H11_276 0.48 -0.4
101,236 - Ac3H11_276 0.48 -0.1
101,236 - Ac3H11_276 0.48 -2.7
101,236 - Ac3H11_276 0.48 +0.6
101,236 - Ac3H11_276 0.48 +0.6
101,236 - Ac3H11_276 0.48 -0.2
101,236 - Ac3H11_276 0.48 -0.9
101,298 + Ac3H11_276 0.59 +4.3
101,298 + Ac3H11_276 0.59 -0.1
101,299 - Ac3H11_276 0.59 +1.7
101,299 - Ac3H11_276 0.59 -0.0
101,299 - Ac3H11_276 0.59 -0.8
101,409 + Ac3H11_276 0.79 +0.1
101,410 - Ac3H11_276 0.79 +0.2
101,519 + -0.5
101,519 + +0.3
101,523 + +1.9
101,523 + +0.3
101,523 + +0.5
101,523 + -0.7
101,523 + -0.6
101,523 + +0.4
101,523 + +0.1
101,523 + +0.1
101,523 + -0.5
101,523 + +0.3
101,524 - -1.3
101,524 - -1.3
101,524 - -0.4
101,524 - +0.3
101,524 - +0.2
101,524 - -0.5
101,524 - +0.1
101,524 - +1.5
101,524 - +1.2
101,524 - +1.0
101,524 - +0.1
101,524 - +0.4
101,524 - +0.4
101,524 - +0.5
101,536 + -0.7
101,536 + +0.8
101,579 + -1.2
101,579 + -1.9
101,634 + -1.1
101,666 + Ac3H11_277 0.12 -2.7
101,889 + Ac3H11_277 0.37 -2.6
101,889 + Ac3H11_277 0.37 -1.0
101,889 + Ac3H11_277 0.37 -1.9
101,892 + Ac3H11_277 0.37 -1.3
101,892 + Ac3H11_277 0.37 -0.5
101,892 + Ac3H11_277 0.37 -0.4
101,892 + Ac3H11_277 0.37 -1.0
101,892 + Ac3H11_277 0.37 -1.4
101,892 + Ac3H11_277 0.37 -0.8
101,973 + Ac3H11_277 0.46 -3.0
101,973 + Ac3H11_277 0.46 -0.2
101,973 + Ac3H11_277 0.46 +0.3
101,973 + Ac3H11_277 0.46 -3.8
101,973 + Ac3H11_277 0.46 +0.4
101,973 + Ac3H11_277 0.46 -1.3
102,106 + Ac3H11_277 0.61 -0.3
102,106 + Ac3H11_277 0.61 -1.8
102,106 + Ac3H11_277 0.61 -1.9
102,126 + Ac3H11_277 0.63 +1.0
102,126 + Ac3H11_277 0.63 +0.1
102,126 + Ac3H11_277 0.63 -1.1

Or see this region's nucleotide sequence