Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1150

Experiment: Aluminum chloride 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1148 and Ac3H11_1149 are separated by 97 nucleotidesAc3H11_1149 and Ac3H11_1150 overlap by 35 nucleotidesAc3H11_1150 and Ac3H11_1151 are separated by 618 nucleotidesAc3H11_1151 and Ac3H11_1152 overlap by 2 nucleotides Ac3H11_1148 - putative transcriptional regulator, MerR family, at 101,240 to 101,608 _1148 Ac3H11_1149 - hypothetical protein, at 101,706 to 102,194 _1149 Ac3H11_1150 - Major facilitator family transporter, at 102,160 to 103,407 _1150 Ac3H11_1151 - hypothetical protein, at 104,026 to 104,154 _1151 Ac3H11_1152 - hypothetical protein, at 104,153 to 104,401 _1152 Position (kb) 102 103 104Strain fitness (log2 ratio) -3 -2 -1 0 1at 101.183 kb on + strandat 101.187 kb on - strandat 101.437 kb on + strand, within Ac3H11_1148at 101.437 kb on + strand, within Ac3H11_1148at 101.437 kb on + strand, within Ac3H11_1148at 101.466 kb on + strand, within Ac3H11_1148at 101.466 kb on + strand, within Ac3H11_1148at 101.466 kb on + strand, within Ac3H11_1148at 101.466 kb on + strand, within Ac3H11_1148at 101.466 kb on + strand, within Ac3H11_1148at 101.466 kb on + strand, within Ac3H11_1148at 101.466 kb on + strand, within Ac3H11_1148at 101.467 kb on - strand, within Ac3H11_1148at 101.467 kb on - strand, within Ac3H11_1148at 101.467 kb on - strand, within Ac3H11_1148at 101.467 kb on - strand, within Ac3H11_1148at 101.496 kb on + strand, within Ac3H11_1148at 101.550 kb on + strand, within Ac3H11_1148at 101.550 kb on + strand, within Ac3H11_1148at 101.550 kb on + strand, within Ac3H11_1148at 101.550 kb on + strand, within Ac3H11_1148at 101.654 kb on + strandat 101.654 kb on + strandat 101.654 kb on + strandat 101.654 kb on + strandat 101.654 kb on + strandat 101.654 kb on + strandat 101.655 kb on - strandat 101.737 kb on - strandat 101.767 kb on - strand, within Ac3H11_1149at 101.767 kb on - strand, within Ac3H11_1149at 102.018 kb on + strand, within Ac3H11_1149at 102.018 kb on + strand, within Ac3H11_1149at 102.018 kb on + strand, within Ac3H11_1149at 102.018 kb on + strand, within Ac3H11_1149at 102.019 kb on - strand, within Ac3H11_1149at 102.248 kb on + strandat 102.248 kb on + strandat 102.248 kb on + strandat 102.248 kb on + strandat 102.249 kb on - strandat 102.249 kb on - strandat 102.249 kb on - strandat 102.249 kb on - strandat 102.249 kb on - strandat 102.340 kb on + strand, within Ac3H11_1150at 102.395 kb on + strand, within Ac3H11_1150at 102.396 kb on - strand, within Ac3H11_1150at 102.396 kb on - strand, within Ac3H11_1150at 102.410 kb on + strand, within Ac3H11_1150at 102.410 kb on + strand, within Ac3H11_1150at 102.410 kb on + strand, within Ac3H11_1150at 102.410 kb on + strand, within Ac3H11_1150at 102.411 kb on - strand, within Ac3H11_1150at 102.411 kb on - strand, within Ac3H11_1150at 102.563 kb on + strand, within Ac3H11_1150at 102.564 kb on - strand, within Ac3H11_1150at 102.564 kb on - strand, within Ac3H11_1150at 102.564 kb on - strand, within Ac3H11_1150at 102.629 kb on + strand, within Ac3H11_1150at 102.692 kb on + strand, within Ac3H11_1150at 102.692 kb on + strand, within Ac3H11_1150at 102.692 kb on + strand, within Ac3H11_1150at 102.692 kb on + strand, within Ac3H11_1150at 102.692 kb on + strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.693 kb on - strand, within Ac3H11_1150at 102.998 kb on + strand, within Ac3H11_1150at 102.999 kb on - strand, within Ac3H11_1150at 102.999 kb on - strand, within Ac3H11_1150at 103.082 kb on + strand, within Ac3H11_1150at 103.082 kb on + strand, within Ac3H11_1150at 103.082 kb on + strand, within Ac3H11_1150at 103.082 kb on + strand, within Ac3H11_1150at 103.082 kb on + strand, within Ac3H11_1150at 103.082 kb on + strand, within Ac3H11_1150at 103.082 kb on + strand, within Ac3H11_1150at 103.160 kb on + strand, within Ac3H11_1150at 103.160 kb on + strand, within Ac3H11_1150at 103.160 kb on + strand, within Ac3H11_1150at 103.160 kb on + strand, within Ac3H11_1150at 103.160 kb on + strand, within Ac3H11_1150at 103.160 kb on + strand, within Ac3H11_1150at 103.161 kb on - strand, within Ac3H11_1150at 103.161 kb on - strand, within Ac3H11_1150at 103.161 kb on - strand, within Ac3H11_1150at 103.161 kb on - strand, within Ac3H11_1150at 103.479 kb on + strandat 103.479 kb on + strandat 103.565 kb on + strandat 103.566 kb on - strandat 103.566 kb on - strandat 103.566 kb on - strandat 103.566 kb on - strandat 103.570 kb on + strandat 103.570 kb on + strandat 103.570 kb on + strandat 103.570 kb on + strandat 103.570 kb on + strandat 103.570 kb on + strandat 103.571 kb on - strandat 103.571 kb on - strandat 103.571 kb on - strandat 103.571 kb on - strandat 103.571 kb on - strandat 103.571 kb on - strandat 103.571 kb on - strandat 103.571 kb on - strandat 103.643 kb on - strandat 103.927 kb on + strandat 103.927 kb on + strandat 103.927 kb on + strandat 103.927 kb on + strandat 103.927 kb on + strandat 103.927 kb on + strandat 103.927 kb on + strandat 103.927 kb on + strandat 103.927 kb on + strandat 103.927 kb on + strandat 103.927 kb on + strandat 103.928 kb on - strandat 103.928 kb on - strandat 103.928 kb on - strandat 103.928 kb on - strandat 103.928 kb on - strandat 103.928 kb on - strandat 104.159 kb on + strandat 104.159 kb on + strandat 104.159 kb on + strandat 104.159 kb on + strandat 104.159 kb on + strandat 104.159 kb on + strandat 104.159 kb on + strandat 104.159 kb on + strandat 104.159 kb on + strandat 104.160 kb on - strandat 104.198 kb on + strand, within Ac3H11_1152at 104.198 kb on + strand, within Ac3H11_1152at 104.199 kb on - strand, within Ac3H11_1152at 104.199 kb on - strand, within Ac3H11_1152at 104.199 kb on - strand, within Ac3H11_1152at 104.399 kb on + strandat 104.399 kb on + strandat 104.400 kb on - strandat 104.400 kb on - strandat 104.400 kb on - strandat 104.400 kb on - strandat 104.400 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum chloride 2 mM
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101,183 + -0.5
101,187 - -0.2
101,437 + Ac3H11_1148 0.53 -0.4
101,437 + Ac3H11_1148 0.53 -0.8
101,437 + Ac3H11_1148 0.53 +0.3
101,466 + Ac3H11_1148 0.61 +0.1
101,466 + Ac3H11_1148 0.61 -0.2
101,466 + Ac3H11_1148 0.61 -0.5
101,466 + Ac3H11_1148 0.61 -0.8
101,466 + Ac3H11_1148 0.61 -0.4
101,466 + Ac3H11_1148 0.61 -0.0
101,466 + Ac3H11_1148 0.61 -2.6
101,467 - Ac3H11_1148 0.62 -0.9
101,467 - Ac3H11_1148 0.62 +1.1
101,467 - Ac3H11_1148 0.62 +0.3
101,467 - Ac3H11_1148 0.62 +0.3
101,496 + Ac3H11_1148 0.69 +0.4
101,550 + Ac3H11_1148 0.84 -0.8
101,550 + Ac3H11_1148 0.84 -0.5
101,550 + Ac3H11_1148 0.84 +0.9
101,550 + Ac3H11_1148 0.84 -0.2
101,654 + -0.4
101,654 + -0.8
101,654 + -0.2
101,654 + -0.2
101,654 + -0.3
101,654 + +0.0
101,655 - +0.4
101,737 - +0.0
101,767 - Ac3H11_1149 0.12 -0.8
101,767 - Ac3H11_1149 0.12 -0.6
102,018 + Ac3H11_1149 0.64 +0.5
102,018 + Ac3H11_1149 0.64 +0.2
102,018 + Ac3H11_1149 0.64 -0.9
102,018 + Ac3H11_1149 0.64 -0.9
102,019 - Ac3H11_1149 0.64 +0.9
102,248 + -0.1
102,248 + +0.5
102,248 + +1.1
102,248 + +0.0
102,249 - +0.8
102,249 - +0.5
102,249 - -0.1
102,249 - -0.0
102,249 - -0.4
102,340 + Ac3H11_1150 0.14 -0.1
102,395 + Ac3H11_1150 0.19 +0.8
102,396 - Ac3H11_1150 0.19 -0.1
102,396 - Ac3H11_1150 0.19 +0.3
102,410 + Ac3H11_1150 0.20 -1.1
102,410 + Ac3H11_1150 0.20 -1.4
102,410 + Ac3H11_1150 0.20 -0.7
102,410 + Ac3H11_1150 0.20 -0.5
102,411 - Ac3H11_1150 0.20 +1.1
102,411 - Ac3H11_1150 0.20 -1.7
102,563 + Ac3H11_1150 0.32 +0.6
102,564 - Ac3H11_1150 0.32 -1.2
102,564 - Ac3H11_1150 0.32 +0.3
102,564 - Ac3H11_1150 0.32 +0.7
102,629 + Ac3H11_1150 0.38 -0.6
102,692 + Ac3H11_1150 0.43 -0.5
102,692 + Ac3H11_1150 0.43 -2.2
102,692 + Ac3H11_1150 0.43 -0.1
102,692 + Ac3H11_1150 0.43 -0.2
102,692 + Ac3H11_1150 0.43 -0.2
102,693 - Ac3H11_1150 0.43 -0.6
102,693 - Ac3H11_1150 0.43 +0.6
102,693 - Ac3H11_1150 0.43 -0.7
102,693 - Ac3H11_1150 0.43 +0.1
102,693 - Ac3H11_1150 0.43 +0.0
102,693 - Ac3H11_1150 0.43 -0.0
102,693 - Ac3H11_1150 0.43 +0.4
102,693 - Ac3H11_1150 0.43 +0.0
102,693 - Ac3H11_1150 0.43 -0.3
102,693 - Ac3H11_1150 0.43 +0.2
102,693 - Ac3H11_1150 0.43 -1.1
102,693 - Ac3H11_1150 0.43 -0.8
102,693 - Ac3H11_1150 0.43 +0.2
102,693 - Ac3H11_1150 0.43 -0.0
102,693 - Ac3H11_1150 0.43 -2.0
102,693 - Ac3H11_1150 0.43 +0.2
102,693 - Ac3H11_1150 0.43 +0.7
102,693 - Ac3H11_1150 0.43 -0.5
102,693 - Ac3H11_1150 0.43 -0.1
102,693 - Ac3H11_1150 0.43 -0.5
102,998 + Ac3H11_1150 0.67 -0.5
102,999 - Ac3H11_1150 0.67 -0.7
102,999 - Ac3H11_1150 0.67 +1.0
103,082 + Ac3H11_1150 0.74 +0.2
103,082 + Ac3H11_1150 0.74 +0.3
103,082 + Ac3H11_1150 0.74 -1.5
103,082 + Ac3H11_1150 0.74 +0.6
103,082 + Ac3H11_1150 0.74 +1.0
103,082 + Ac3H11_1150 0.74 -0.3
103,082 + Ac3H11_1150 0.74 -0.2
103,160 + Ac3H11_1150 0.80 -1.3
103,160 + Ac3H11_1150 0.80 -3.5
103,160 + Ac3H11_1150 0.80 -1.1
103,160 + Ac3H11_1150 0.80 +0.6
103,160 + Ac3H11_1150 0.80 +0.8
103,160 + Ac3H11_1150 0.80 -0.8
103,161 - Ac3H11_1150 0.80 -1.1
103,161 - Ac3H11_1150 0.80 +0.1
103,161 - Ac3H11_1150 0.80 +0.9
103,161 - Ac3H11_1150 0.80 +0.1
103,479 + -0.3
103,479 + +0.5
103,565 + +0.2
103,566 - +1.6
103,566 - -0.4
103,566 - -0.6
103,566 - +0.3
103,570 + +0.6
103,570 + -1.3
103,570 + -1.0
103,570 + -0.0
103,570 + -1.7
103,570 + +0.4
103,571 - -0.9
103,571 - -0.4
103,571 - -0.5
103,571 - +0.0
103,571 - +1.7
103,571 - +0.8
103,571 - -1.2
103,571 - -2.1
103,643 - -0.2
103,927 + -1.0
103,927 + -0.1
103,927 + -0.7
103,927 + -0.0
103,927 + -0.3
103,927 + +0.2
103,927 + -0.3
103,927 + +0.9
103,927 + +0.2
103,927 + +0.1
103,927 + -0.2
103,928 - +0.5
103,928 - +0.6
103,928 - +0.0
103,928 - -1.5
103,928 - +0.4
103,928 - +0.3
104,159 + +0.6
104,159 + +0.1
104,159 + +0.7
104,159 + +0.2
104,159 + -0.0
104,159 + -0.6
104,159 + +0.3
104,159 + -0.4
104,159 + -0.0
104,160 - -0.6
104,198 + Ac3H11_1152 0.18 +1.3
104,198 + Ac3H11_1152 0.18 -0.3
104,199 - Ac3H11_1152 0.18 +1.3
104,199 - Ac3H11_1152 0.18 -0.2
104,199 - Ac3H11_1152 0.18 -0.8
104,399 + +1.2
104,399 + -0.4
104,400 - +1.0
104,400 - +1.3
104,400 - +0.7
104,400 - -0.3
104,400 - -0.7

Or see this region's nucleotide sequence