Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS14555

Experiment: Trans-2-methyl-2-butenoic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS14545 and ABZR87_RS14550 are separated by 122 nucleotidesABZR87_RS14550 and ABZR87_RS14555 are separated by 71 nucleotidesABZR87_RS14555 and ABZR87_RS14560 are separated by 22 nucleotides ABZR87_RS14545: ABZR87_RS14545 - citrate synthase, at 3,073,132 to 3,074,433 _RS14545 ABZR87_RS14550: ABZR87_RS14550 - succinate dehydrogenase assembly factor 2, at 3,074,556 to 3,074,843 _RS14550 ABZR87_RS14555: ABZR87_RS14555 - succinate dehydrogenase iron-sulfur subunit, at 3,074,915 to 3,075,616 _RS14555 ABZR87_RS14560: ABZR87_RS14560 - succinate dehydrogenase flavoprotein subunit, at 3,075,639 to 3,077,417 _RS14560 Position (kb) 3074 3075 3076Strain fitness (log2 ratio) -1 0 1at 3075.641 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Trans-2-methyl-2-butenoic (C)
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3,075,641 - +0.6

Or see this region's nucleotide sequence