Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05880

Experiment: Trans-2-methyl-2-butenoic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trans-2-methyl-2-butenoic (C)
1,254,236	+		ABZR87_RS05875	0.17	-0.1
1,254,324	+		ABZR87_RS05875	0.27	+0.3
1,254,324	+		ABZR87_RS05875	0.27	-0.2
1,254,324	+		ABZR87_RS05875	0.27	-0.4
1,254,324	+		ABZR87_RS05875	0.27	+0.5
1,254,324	+		ABZR87_RS05875	0.27	+0.1
1,254,324	+		ABZR87_RS05875	0.27	-0.5
1,254,324	+		ABZR87_RS05875	0.27	+0.6
1,254,324	+		ABZR87_RS05875	0.27	+1.1
1,254,325	-		ABZR87_RS05875	0.27	-0.9
1,254,325	-		ABZR87_RS05875	0.27	-0.0
1,254,325	-		ABZR87_RS05875	0.27	-0.2
1,254,325	-		ABZR87_RS05875	0.27	-0.6
1,254,325	-		ABZR87_RS05875	0.27	-0.6
1,254,325	-		ABZR87_RS05875	0.27	+0.3
1,254,325	-		ABZR87_RS05875	0.27	+0.1
1,254,325	-		ABZR87_RS05875	0.27	-0.3
1,254,325	-		ABZR87_RS05875	0.27	-0.4
1,254,389	+		ABZR87_RS05875	0.34	+0.5
1,254,389	+		ABZR87_RS05875	0.34	-0.1
1,254,389	+		ABZR87_RS05875	0.34	+0.1
1,254,389	+		ABZR87_RS05875	0.34	+0.5
1,254,390	-		ABZR87_RS05875	0.34	-0.5
1,254,407	+		ABZR87_RS05875	0.35	-0.2
1,254,407	+		ABZR87_RS05875	0.35	+0.4
1,254,407	+		ABZR87_RS05875	0.35	+0.3
1,254,417	+		ABZR87_RS05875	0.37	+0.9
1,254,417	+		ABZR87_RS05875	0.37	-0.4
1,254,417	+		ABZR87_RS05875	0.37	-0.4
1,254,418	-		ABZR87_RS05875	0.37	+0.2
1,254,465	+		ABZR87_RS05875	0.42	-1.2
1,254,465	+		ABZR87_RS05875	0.42	+0.6
1,254,466	-		ABZR87_RS05875	0.42	-1.2
1,254,466	-		ABZR87_RS05875	0.42	-0.3
1,254,466	-		ABZR87_RS05875	0.42	-0.3
1,254,482	+		ABZR87_RS05875	0.44	+0.1
1,254,482	+		ABZR87_RS05875	0.44	+1.7
1,254,483	-		ABZR87_RS05875	0.44	+0.5
1,254,664	-		ABZR87_RS05875	0.63	-0.4
1,254,667	+		ABZR87_RS05875	0.64	+0.4
1,254,667	+		ABZR87_RS05875	0.64	+0.3
1,254,667	+		ABZR87_RS05875	0.64	+0.2
1,254,667	+		ABZR87_RS05875	0.64	+0.5
1,254,667	+		ABZR87_RS05875	0.64	+2.0
1,254,668	-		ABZR87_RS05875	0.64	-0.7
1,254,668	-		ABZR87_RS05875	0.64	+1.2
1,254,668	-		ABZR87_RS05875	0.64	+0.7
1,254,668	-		ABZR87_RS05875	0.64	-0.2
1,254,696	+		ABZR87_RS05875	0.67	-0.7
1,254,697	-		ABZR87_RS05875	0.67	-0.1
1,254,697	-		ABZR87_RS05875	0.67	-1.5
1,254,707	+		ABZR87_RS05875	0.68	+0.5
1,254,707	+		ABZR87_RS05875	0.68	+0.1
1,254,708	-		ABZR87_RS05875	0.68	-0.2
1,254,712	+		ABZR87_RS05875	0.68	-0.1
1,254,712	+		ABZR87_RS05875	0.68	-0.3
1,254,712	+		ABZR87_RS05875	0.68	-1.2
1,254,712	+		ABZR87_RS05875	0.68	-0.3
1,254,713	-		ABZR87_RS05875	0.69	-0.5
1,254,713	-		ABZR87_RS05875	0.69	-0.3
1,254,756	+		ABZR87_RS05875	0.73	+0.5
1,254,756	+		ABZR87_RS05875	0.73	-0.9
1,254,756	+		ABZR87_RS05875	0.73	-0.1
1,254,756	+		ABZR87_RS05875	0.73	-0.5
1,254,756	+		ABZR87_RS05875	0.73	+0.8
1,254,756	+		ABZR87_RS05875	0.73	-2.3
1,254,756	+		ABZR87_RS05875	0.73	-1.4
1,254,756	+		ABZR87_RS05875	0.73	-0.9
1,254,757	-		ABZR87_RS05875	0.73	-0.3
1,254,757	-		ABZR87_RS05875	0.73	-1.0
1,254,757	-		ABZR87_RS05875	0.73	+0.2
1,254,782	+		ABZR87_RS05875	0.76	+0.8
1,254,782	+		ABZR87_RS05875	0.76	-0.7
1,254,783	-		ABZR87_RS05875	0.76	+0.4
1,254,798	+		ABZR87_RS05875	0.78	-0.4
1,254,798	+		ABZR87_RS05875	0.78	+0.4
1,254,798	+		ABZR87_RS05875	0.78	-1.5
1,254,799	-		ABZR87_RS05875	0.78	-0.0
1,254,799	-		ABZR87_RS05875	0.78	-0.2
1,254,799	-		ABZR87_RS05875	0.78	-0.5
1,254,799	-		ABZR87_RS05875	0.78	+1.0
1,254,799	-		ABZR87_RS05875	0.78	+0.7
1,254,880	+		ABZR87_RS05875	0.87	+0.2
1,254,880	+		ABZR87_RS05875	0.87	-0.1
1,254,881	-		ABZR87_RS05875	0.87	-1.1
1,254,881	-		ABZR87_RS05875	0.87	-0.4
1,254,881	-		ABZR87_RS05875	0.87	-0.5
1,254,881	-		ABZR87_RS05875	0.87	-0.0
1,254,903	+		ABZR87_RS05875	0.89	+0.6
1,254,904	-		ABZR87_RS05875	0.89	-0.2
1,254,904	-		ABZR87_RS05875	0.89	-0.3
1,254,904	-		ABZR87_RS05875	0.89	-1.6
1,254,904	-		ABZR87_RS05875	0.89	+2.1
1,254,904	-		ABZR87_RS05875	0.89	-0.7
1,254,904	-		ABZR87_RS05875	0.89	+0.0
1,254,904	-		ABZR87_RS05875	0.89	+0.5
1,254,989	+				-0.0
1,254,989	+				-0.1
1,254,989	+				+0.8
1,254,989	+				+0.3
1,254,990	-				+0.9
1,255,020	+				-0.5
1,255,023	+				-1.6
1,255,023	+				-0.6
1,255,023	+				+0.3
1,255,023	+				-0.3
1,255,023	+				-0.1
1,255,023	+				+0.0
1,255,024	-				+1.0
1,255,024	-				+0.2
1,255,057	+				-0.2
1,255,131	+				-0.6
1,255,131	+				-0.5
1,255,132	-				+0.0
1,255,132	-				+0.2
1,255,132	-				-0.2
1,255,132	-				-0.2
1,255,132	-				+1.2
1,255,132	-				-0.2
1,255,132	-				-0.4
1,255,161	+				-0.2
1,255,162	-				-0.1
1,255,162	-				+0.8
1,255,177	+				+0.6
1,255,177	+				-0.6
1,255,177	+				+0.7
1,255,178	-				-0.1
1,255,200	+				-0.0
1,255,201	-				-0.4
1,255,229	+				-0.1
1,255,230	-				+0.1
1,255,257	+				-0.3
1,255,258	-				-1.0
1,255,258	-				-0.5
1,255,294	+				+0.0
1,255,294	+				+0.9
1,255,404	+		ABZR87_RS05880	0.18	-0.2
1,255,404	+		ABZR87_RS05880	0.18	+0.1
1,255,404	+		ABZR87_RS05880	0.18	-0.1
1,255,404	+		ABZR87_RS05880	0.18	-1.9
1,255,404	+		ABZR87_RS05880	0.18	+0.8
1,255,405	-		ABZR87_RS05880	0.18	+0.4
1,255,405	-		ABZR87_RS05880	0.18	-1.0
1,255,559	+		ABZR87_RS05880	0.32	+0.5
1,255,559	+		ABZR87_RS05880	0.32	+0.6
1,255,559	+		ABZR87_RS05880	0.32	+0.1
1,255,560	-		ABZR87_RS05880	0.32	-0.6
1,255,560	-		ABZR87_RS05880	0.32	+0.9
1,255,560	-		ABZR87_RS05880	0.32	+0.5
1,255,626	+		ABZR87_RS05880	0.38	+0.6
1,255,626	+		ABZR87_RS05880	0.38	+1.2
1,255,626	+		ABZR87_RS05880	0.38	-0.1
1,255,626	+		ABZR87_RS05880	0.38	-0.1
1,255,626	+		ABZR87_RS05880	0.38	-1.1
1,255,627	-		ABZR87_RS05880	0.38	+0.3
1,255,627	-		ABZR87_RS05880	0.38	-0.6
1,255,627	-		ABZR87_RS05880	0.38	-1.4
1,255,700	+		ABZR87_RS05880	0.44	+0.2
1,255,700	+		ABZR87_RS05880	0.44	-0.2
1,255,701	-		ABZR87_RS05880	0.44	-0.8
1,255,701	-		ABZR87_RS05880	0.44	+1.5
1,255,748	+		ABZR87_RS05880	0.49	-0.6
1,255,748	+		ABZR87_RS05880	0.49	+0.6
1,255,748	+		ABZR87_RS05880	0.49	-0.3
1,255,749	-		ABZR87_RS05880	0.49	-0.1
1,255,749	-		ABZR87_RS05880	0.49	+0.3
1,255,749	-		ABZR87_RS05880	0.49	+0.4
1,255,803	+		ABZR87_RS05880	0.53	+0.5
1,255,804	-		ABZR87_RS05880	0.53	-0.2
1,255,804	-		ABZR87_RS05880	0.53	-0.2
1,255,804	-		ABZR87_RS05880	0.53	-0.9
1,255,809	+		ABZR87_RS05880	0.54	+0.6
1,255,809	+		ABZR87_RS05880	0.54	-0.9
1,255,809	+		ABZR87_RS05880	0.54	+0.4
1,255,810	-		ABZR87_RS05880	0.54	-0.2
1,255,810	-		ABZR87_RS05880	0.54	-0.4
1,255,810	-		ABZR87_RS05880	0.54	-0.3
1,255,810	-		ABZR87_RS05880	0.54	-0.7
1,255,810	-		ABZR87_RS05880	0.54	+2.2
1,255,926	-		ABZR87_RS05880	0.64	-0.1
1,256,088	+		ABZR87_RS05880	0.79	-0.6
1,256,088	+		ABZR87_RS05880	0.79	+2.5
1,256,089	-		ABZR87_RS05880	0.79	-0.6
1,256,089	-		ABZR87_RS05880	0.79	+0.8
1,256,089	-		ABZR87_RS05880	0.79	-0.5
1,256,152	+		ABZR87_RS05880	0.84	-0.4
1,256,295	-				-0.4
1,256,295	-				-0.7
1,256,369	+				+0.7
1,256,370	-				+0.9
1,256,370	-				+0.3
1,256,370	-				-0.3
1,256,398	+				-1.2
1,256,398	+				+0.8
1,256,400	+				+0.7
1,256,400	+				-1.3
1,256,400	+				+0.1
1,256,400	+				+0.2
1,256,400	+				+0.8
1,256,401	-				-0.8
1,256,401	-				-0.2
1,256,401	-				+0.7
1,256,401	-				-0.8
1,256,401	-				+0.7
1,256,426	-				-1.0
1,256,426	-				-0.3
1,256,426	-				+0.9
1,256,474	+				-0.2
1,256,474	+				-0.1
1,256,474	+				+1.0
1,256,474	+				-0.4
1,256,477	-				-0.1
1,256,508	-				+0.1
1,256,546	-				+1.4
1,256,546	-				+0.5
1,256,546	-				+0.6
1,256,566	-				-1.3
1,256,621	-				+0.1
1,256,662	-				+0.1
1,256,697	-				-0.1
1,256,732	-				-0.1
1,256,732	-				-1.9
1,256,733	+				-0.5
1,256,733	+				-0.4
1,256,734	-				-0.4
1,256,734	-				+0.9
1,256,751	+				+0.1
1,256,800	+				+0.2
1,256,801	-				+0.9
1,256,882	+				-0.3
1,256,883	-				+0.2
1,256,918	+				-1.1
1,256,919	-				-1.4
1,257,064	+				+0.3
1,257,064	+				+1.0
1,257,064	+				+0.7
1,257,064	+				+0.9
1,257,064	+				+1.3
1,257,064	+				-0.6
1,257,064	+				+0.9
1,257,064	+				+1.5
1,257,064	+				+0.6
1,257,064	+				-0.4
1,257,064	+				-1.5
1,257,065	-				-0.0
1,257,065	-				+0.0
1,257,065	-				+0.3
1,257,065	-				+0.7
1,257,065	-				+1.4
1,257,065	-				-0.5
1,257,065	-				-0.6
1,257,065	-				+0.2
1,257,065	-				-0.7
1,257,065	-				+0.1
1,257,065	-				-0.9
1,257,065	-				-0.3
1,257,065	-				-0.2
1,257,065	-				+0.9
1,257,065	-				+1.1
1,257,065	-				-0.1
1,257,065	-				-0.2
1,257,070	+				+0.6
1,257,070	+				-0.7
1,257,070	+				-2.9
1,257,070	+				-0.5
1,257,070	+				+0.5
1,257,071	-				-0.5
1,257,072	+				+1.6
1,257,072	+				-1.0
1,257,072	+				-1.0
1,257,072	+				+0.4
1,257,073	-				-1.2
1,257,073	-				-0.2
1,257,073	-				-0.1
1,257,073	-				-1.8
1,257,094	-				+0.4
1,257,112	-				-0.2
1,257,112	-				-0.1
1,257,170	+		ABZR87_RS05885	0.14	-0.1
1,257,170	+		ABZR87_RS05885	0.14	+1.5
1,257,170	+		ABZR87_RS05885	0.14	+0.5
1,257,170	+		ABZR87_RS05885	0.14	-0.2
1,257,170	+		ABZR87_RS05885	0.14	+0.4
1,257,170	+		ABZR87_RS05885	0.14	-0.5
1,257,170	+		ABZR87_RS05885	0.14	+0.9
1,257,170	+		ABZR87_RS05885	0.14	-0.3
1,257,171	-		ABZR87_RS05885	0.14	-0.2
1,257,171	-		ABZR87_RS05885	0.14	-0.0
1,257,255	-		ABZR87_RS05885	0.24	+0.1
1,257,255	-		ABZR87_RS05885	0.24	+0.2
1,257,255	-		ABZR87_RS05885	0.24	+0.1
1,257,318	+		ABZR87_RS05885	0.32	+0.1
1,257,318	+		ABZR87_RS05885	0.32	-0.8
1,257,319	-		ABZR87_RS05885	0.32	+0.6
1,257,319	-		ABZR87_RS05885	0.32	+0.6