Experiment: nitrite 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0795 and Shew_0796 are separated by 302 nucleotides Shew_0796 and Shew_0797 are separated by 103 nucleotides Shew_0797 and Shew_0798 are separated by 554 nucleotides
Shew_0795: Shew_0795 - hypothetical protein (RefSeq), at 908,006 to 908,410
_0795
Shew_0796: Shew_0796 - hypothetical protein (RefSeq), at 908,713 to 908,910
_0796
Shew_0797: Shew_0797 - hypothetical protein (RefSeq), at 909,014 to 910,432
_0797
Shew_0798: Shew_0798 - hypothetical protein (RefSeq), at 910,987 to 911,424
_0798
Position (kb) 909
910
911 Strain fitness (log2 ratio) -1
0
1
2
3
4
5 at 908.089 kb on + strand, within Shew_0795 at 908.332 kb on + strand, within Shew_0795 at 908.412 kb on + strand at 908.510 kb on - strand at 908.611 kb on - strand at 908.710 kb on + strand at 908.710 kb on + strand at 908.718 kb on - strand at 908.918 kb on + strand at 908.926 kb on - strand at 908.936 kb on + strand at 908.975 kb on - strand at 909.068 kb on + strand at 909.309 kb on + strand, within Shew_0797 at 909.341 kb on + strand, within Shew_0797 at 909.366 kb on + strand, within Shew_0797 at 909.810 kb on + strand, within Shew_0797 at 910.036 kb on - strand, within Shew_0797 at 910.137 kb on + strand, within Shew_0797 at 910.137 kb on + strand, within Shew_0797 at 910.145 kb on - strand, within Shew_0797 at 910.589 kb on + strand at 910.691 kb on - strand at 910.910 kb on + strand at 911.039 kb on + strand, within Shew_0798 at 911.147 kb on + strand, within Shew_0798 at 911.155 kb on - strand, within Shew_0798 at 911.155 kb on - strand, within Shew_0798 at 911.252 kb on - strand, within Shew_0798
Per-strain Table
Position Strand Gene LocusTag Fraction nitrite 200 mM remove 908,089 + Shew_0795 0.20 +1.2 908,332 + Shew_0795 0.80 +0.7 908,412 + +1.0 908,510 - +1.5 908,611 - -0.1 908,710 + -0.6 908,710 + -0.2 908,718 - +0.3 908,918 + +0.1 908,926 - +0.4 908,936 + -1.0 908,975 - -0.4 909,068 + -0.7 909,309 + Shew_0797 0.21 +0.2 909,341 + Shew_0797 0.23 -0.1 909,366 + Shew_0797 0.25 +5.0 909,810 + Shew_0797 0.56 +0.6 910,036 - Shew_0797 0.72 +0.6 910,137 + Shew_0797 0.79 +0.1 910,137 + Shew_0797 0.79 -0.3 910,145 - Shew_0797 0.80 -0.0 910,589 + -0.4 910,691 - -0.3 910,910 + +1.9 911,039 + Shew_0798 0.12 +0.2 911,147 + Shew_0798 0.37 +0.8 911,155 - Shew_0798 0.38 +0.1 911,155 - Shew_0798 0.38 +0.2 911,252 - Shew_0798 0.61 -0.1
Or see this region's nucleotide sequence