Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22765

Experiment: L-Histidine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_22755 and AO353_22765 are separated by 413 nucleotidesAO353_22765 and AO353_22770 are separated by 263 nucleotides AO353_22755: AO353_22755 - hypothetical protein, at 4,984,578 to 4,985,552 _22755 AO353_22765: AO353_22765 - addiction module antitoxin, at 4,985,966 to 4,986,256 _22765 AO353_22770: AO353_22770 - amidohydrolase, at 4,986,520 to 4,988,478 _22770 Position (kb) 4985 4986 4987Strain fitness (log2 ratio) -2 -1 0 1 2at 4985.205 kb on + strand, within AO353_22755at 4985.205 kb on + strand, within AO353_22755at 4985.206 kb on - strand, within AO353_22755at 4985.206 kb on - strand, within AO353_22755at 4985.206 kb on - strand, within AO353_22755at 4985.303 kb on + strand, within AO353_22755at 4985.303 kb on + strand, within AO353_22755at 4985.303 kb on + strand, within AO353_22755at 4985.304 kb on - strand, within AO353_22755at 4985.304 kb on - strand, within AO353_22755at 4985.379 kb on + strand, within AO353_22755at 4985.380 kb on - strand, within AO353_22755at 4985.388 kb on + strand, within AO353_22755at 4985.388 kb on + strand, within AO353_22755at 4985.388 kb on + strand, within AO353_22755at 4985.388 kb on + strand, within AO353_22755at 4985.388 kb on + strand, within AO353_22755at 4985.389 kb on - strand, within AO353_22755at 4985.389 kb on - strand, within AO353_22755at 4985.389 kb on - strand, within AO353_22755at 4985.389 kb on - strand, within AO353_22755at 4985.389 kb on - strand, within AO353_22755at 4985.390 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.414 kb on - strand, within AO353_22755at 4985.414 kb on - strand, within AO353_22755at 4985.414 kb on - strand, within AO353_22755at 4985.476 kb on + strandat 4985.477 kb on - strandat 4985.477 kb on - strandat 4985.477 kb on - strandat 4985.477 kb on - strandat 4985.487 kb on - strandat 4985.526 kb on + strandat 4985.526 kb on + strandat 4985.527 kb on - strandat 4985.675 kb on + strandat 4985.676 kb on - strandat 4985.676 kb on - strandat 4985.696 kb on + strandat 4985.697 kb on - strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.728 kb on + strandat 4985.728 kb on + strandat 4985.728 kb on + strandat 4985.728 kb on + strandat 4985.728 kb on + strandat 4985.730 kb on + strandat 4985.730 kb on + strandat 4985.730 kb on + strandat 4985.730 kb on + strandat 4985.731 kb on - strandat 4985.731 kb on - strandat 4985.731 kb on - strandat 4985.731 kb on - strandat 4985.803 kb on + strandat 4985.803 kb on + strandat 4985.804 kb on - strandat 4985.804 kb on - strandat 4985.816 kb on - strandat 4985.856 kb on + strandat 4985.857 kb on - strandat 4985.961 kb on + strandat 4985.980 kb on + strandat 4985.980 kb on + strandat 4986.032 kb on + strand, within AO353_22765at 4986.032 kb on + strand, within AO353_22765at 4986.032 kb on + strand, within AO353_22765at 4986.032 kb on + strand, within AO353_22765at 4986.032 kb on + strand, within AO353_22765at 4986.033 kb on - strand, within AO353_22765at 4986.033 kb on - strand, within AO353_22765at 4986.089 kb on + strand, within AO353_22765at 4986.090 kb on - strand, within AO353_22765at 4986.090 kb on - strand, within AO353_22765at 4986.155 kb on + strand, within AO353_22765at 4986.155 kb on + strand, within AO353_22765at 4986.155 kb on + strand, within AO353_22765at 4986.155 kb on + strand, within AO353_22765at 4986.156 kb on - strand, within AO353_22765at 4986.156 kb on - strand, within AO353_22765at 4986.202 kb on + strand, within AO353_22765at 4986.502 kb on + strandat 4986.503 kb on - strandat 4986.503 kb on - strandat 4986.503 kb on - strandat 4986.765 kb on - strand, within AO353_22770at 4986.765 kb on - strand, within AO353_22770at 4986.836 kb on + strand, within AO353_22770at 4986.836 kb on + strand, within AO353_22770at 4986.836 kb on + strand, within AO353_22770at 4986.932 kb on + strand, within AO353_22770at 4986.932 kb on + strand, within AO353_22770at 4986.932 kb on + strand, within AO353_22770at 4986.932 kb on + strand, within AO353_22770at 4986.933 kb on - strand, within AO353_22770at 4986.933 kb on - strand, within AO353_22770at 4986.933 kb on - strand, within AO353_22770at 4986.933 kb on - strand, within AO353_22770at 4986.933 kb on - strand, within AO353_22770at 4986.933 kb on - strand, within AO353_22770at 4986.971 kb on + strand, within AO353_22770at 4986.972 kb on - strand, within AO353_22770at 4987.013 kb on + strand, within AO353_22770at 4987.013 kb on + strand, within AO353_22770at 4987.014 kb on - strand, within AO353_22770at 4987.014 kb on - strand, within AO353_22770at 4987.034 kb on + strand, within AO353_22770at 4987.034 kb on + strand, within AO353_22770at 4987.034 kb on + strand, within AO353_22770at 4987.034 kb on + strand, within AO353_22770at 4987.148 kb on + strand, within AO353_22770at 4987.148 kb on + strand, within AO353_22770at 4987.149 kb on - strand, within AO353_22770

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (C)
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4,985,205 + AO353_22755 0.64 +1.6
4,985,205 + AO353_22755 0.64 -1.3
4,985,206 - AO353_22755 0.64 -0.7
4,985,206 - AO353_22755 0.64 -1.4
4,985,206 - AO353_22755 0.64 +0.4
4,985,303 + AO353_22755 0.74 -0.2
4,985,303 + AO353_22755 0.74 +0.0
4,985,303 + AO353_22755 0.74 -1.2
4,985,304 - AO353_22755 0.74 +0.1
4,985,304 - AO353_22755 0.74 +0.3
4,985,379 + AO353_22755 0.82 +0.1
4,985,380 - AO353_22755 0.82 +0.5
4,985,388 + AO353_22755 0.83 -0.2
4,985,388 + AO353_22755 0.83 +0.4
4,985,388 + AO353_22755 0.83 +0.9
4,985,388 + AO353_22755 0.83 +1.1
4,985,388 + AO353_22755 0.83 +1.1
4,985,389 - AO353_22755 0.83 +1.1
4,985,389 - AO353_22755 0.83 -0.3
4,985,389 - AO353_22755 0.83 +1.5
4,985,389 - AO353_22755 0.83 +1.1
4,985,389 - AO353_22755 0.83 -0.9
4,985,390 + AO353_22755 0.83 -0.8
4,985,413 + AO353_22755 0.86 +0.5
4,985,413 + AO353_22755 0.86 -0.4
4,985,413 + AO353_22755 0.86 +0.9
4,985,413 + AO353_22755 0.86 -0.2
4,985,413 + AO353_22755 0.86 -0.3
4,985,413 + AO353_22755 0.86 -2.3
4,985,413 + AO353_22755 0.86 -0.3
4,985,413 + AO353_22755 0.86 +1.0
4,985,413 + AO353_22755 0.86 -1.1
4,985,414 - AO353_22755 0.86 -0.1
4,985,414 - AO353_22755 0.86 -0.7
4,985,414 - AO353_22755 0.86 -1.2
4,985,476 + +0.2
4,985,477 - -1.0
4,985,477 - -0.5
4,985,477 - +1.2
4,985,477 - -0.4
4,985,487 - +0.1
4,985,526 + -0.1
4,985,526 + +0.1
4,985,527 - +0.9
4,985,675 + -0.3
4,985,676 - -0.7
4,985,676 - +0.4
4,985,696 + +0.1
4,985,697 - +0.1
4,985,715 + -0.1
4,985,715 + +1.2
4,985,715 + +0.5
4,985,715 + -0.9
4,985,715 + -0.1
4,985,715 + -0.2
4,985,715 + +0.2
4,985,715 + -1.1
4,985,716 - +1.5
4,985,716 - +0.2
4,985,716 - +0.1
4,985,716 - -0.3
4,985,716 - +0.9
4,985,716 - +0.1
4,985,716 - +0.1
4,985,716 - +0.1
4,985,716 - -0.7
4,985,728 + -0.6
4,985,728 + +0.3
4,985,728 + -0.6
4,985,728 + +0.3
4,985,728 + +0.9
4,985,730 + +0.3
4,985,730 + +0.8
4,985,730 + -0.1
4,985,730 + -0.4
4,985,731 - -0.4
4,985,731 - +0.7
4,985,731 - -0.3
4,985,731 - +2.1
4,985,803 + -0.3
4,985,803 + -1.2
4,985,804 - -1.2
4,985,804 - +0.9
4,985,816 - +0.6
4,985,856 + -0.9
4,985,857 - -0.4
4,985,961 + +1.0
4,985,980 + +0.6
4,985,980 + +0.1
4,986,032 + AO353_22765 0.23 +1.2
4,986,032 + AO353_22765 0.23 +0.5
4,986,032 + AO353_22765 0.23 +0.1
4,986,032 + AO353_22765 0.23 -0.3
4,986,032 + AO353_22765 0.23 +0.1
4,986,033 - AO353_22765 0.23 +0.7
4,986,033 - AO353_22765 0.23 -0.4
4,986,089 + AO353_22765 0.42 +1.6
4,986,090 - AO353_22765 0.43 -0.1
4,986,090 - AO353_22765 0.43 +0.5
4,986,155 + AO353_22765 0.65 +0.2
4,986,155 + AO353_22765 0.65 +0.9
4,986,155 + AO353_22765 0.65 +1.3
4,986,155 + AO353_22765 0.65 -1.3
4,986,156 - AO353_22765 0.65 +0.0
4,986,156 - AO353_22765 0.65 +1.3
4,986,202 + AO353_22765 0.81 +0.0
4,986,502 + -1.4
4,986,503 - -0.7
4,986,503 - -0.8
4,986,503 - -1.1
4,986,765 - AO353_22770 0.13 -0.3
4,986,765 - AO353_22770 0.13 -0.7
4,986,836 + AO353_22770 0.16 +0.5
4,986,836 + AO353_22770 0.16 -1.1
4,986,836 + AO353_22770 0.16 -1.3
4,986,932 + AO353_22770 0.21 +0.3
4,986,932 + AO353_22770 0.21 -0.5
4,986,932 + AO353_22770 0.21 -0.4
4,986,932 + AO353_22770 0.21 +0.6
4,986,933 - AO353_22770 0.21 +0.4
4,986,933 - AO353_22770 0.21 -0.6
4,986,933 - AO353_22770 0.21 -1.7
4,986,933 - AO353_22770 0.21 -0.1
4,986,933 - AO353_22770 0.21 +0.8
4,986,933 - AO353_22770 0.21 -0.4
4,986,971 + AO353_22770 0.23 +0.7
4,986,972 - AO353_22770 0.23 +0.4
4,987,013 + AO353_22770 0.25 -0.1
4,987,013 + AO353_22770 0.25 +0.3
4,987,014 - AO353_22770 0.25 -0.5
4,987,014 - AO353_22770 0.25 +2.2
4,987,034 + AO353_22770 0.26 -1.0
4,987,034 + AO353_22770 0.26 +0.3
4,987,034 + AO353_22770 0.26 -0.1
4,987,034 + AO353_22770 0.26 -0.7
4,987,148 + AO353_22770 0.32 +0.9
4,987,148 + AO353_22770 0.32 +0.7
4,987,149 - AO353_22770 0.32 -0.3

Or see this region's nucleotide sequence